home > biosample > SAMEA4354257
identifier SAMEA4354257
type biosample
sameAs
sra-sample  ERS1265706
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
ENA-CHECKLIST  ERC000011
External Id  SAMEA4354257
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:54Z
INSDC last update  2016-07-23T06:54:21Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.1
anonymized name  1
calcium  5.84
carbon_percent  4.5473
ch4_flux  0.021274881
co2_ch4_flux_units  ug C/g soil/day
co2_flux  8.195509997
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.236
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  316
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  7.32
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  1
host taxid  1325974
hydrogen  5.66
k_na_ca_mg_h_units  maq/100g
latitude  42.49715
longitude  -76.3711722
magnesium  1.2
microbial_biomass_c  313.1586853
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  10.18945194
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.37641
per_gram_dry_soil_per_hour  Missing: Not provided
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  56.4
ph  6.6
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_A1
potassium  0.18
potential_exchange_capacity  12.98
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -0.41194865
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.037619248
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  8.195509997
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.1
sample type  wetland soil
sodium  0.1
soil_nh4  8.261095057
soil_no3  0.277217955
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  8.538313012
texture_125  7.815413
texture_2  5.742766
texture_20  15.563262
texture_200  8.105047
texture_2000  6.716067
texture_63  12.307672
texture_630  31.656741
texture_6300  0
texture_6point3  12.093032
tot_org_carb_percent  4.3523
total n  4.418826516
total_carbon_percent  4.451
total_inorganic_carbon_percent  0.0986
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546234
sra-submission  ERA678275
sra-study  ERP016583
sra-sample  ERS1265706
sra-experiment  ERX1617004
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T12:06:49Z
dateModified 2021-08-21T13:02:31Z
datePublished 2016-07-24T00:00:00Z