home > biosample > SAMEA4354259
identifier SAMEA4354259
type biosample
sameAs
sra-sample  ERS1265708
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
ENA-CHECKLIST  ERC000011
External Id  SAMEA4354259
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:54Z
INSDC last update  2016-07-23T06:54:21Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.11
anonymized name  11
calcium  9.35
carbon_percent  2.9057
ch4_flux  0.038210879
co2_ch4_flux_units  ug C/g soil/day
co2_flux  27.78872142
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.697
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  145.6
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  12.52
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  11
host taxid  1325974
hydrogen  7.26
k_na_ca_mg_h_units  maq/100g
latitude  42.9111528
longitude  -76.7165222
magnesium  1.92
microbial_biomass_c  1022.457707
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  114.9199248
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.28005
per_gram_dry_soil_per_hour  1213.618513
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  63.31
ph  6.82
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_A11
potassium  0.47
potential_exchange_capacity  19.78
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -8.888618644
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.140608366
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  27.78872142
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.11
sample type  wetland soil
sodium  0.78
soil_nh4  90.7278438
soil_no3  0.432037351
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  91.15988115
texture_125  12.550543
texture_2  9.302652
texture_20  12.681774
texture_200  11.219172
texture_2000  2.168415
texture_63  13.911924
texture_630  24.806759
texture_6300  0
texture_6point3  13.358761
tot_org_carb_percent  2.7339
total n  2.273694715
total_carbon_percent  2.831
total_inorganic_carbon_percent  0.0966
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546236
sra-submission  ERA678275
sra-study  ERP016583
sra-sample  ERS1265708
sra-experiment  ERX1617006
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T12:06:50Z
dateModified 2021-08-21T13:02:31Z
datePublished 2016-07-24T00:00:00Z