home > biosample > SAMEA4354260
identifier SAMEA4354260
type biosample
sameAs
sra-sample  ERS1265709
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
ENA-CHECKLIST  ERC000011
External Id  SAMEA4354260
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:54Z
INSDC last update  2016-07-23T06:54:21Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.12
anonymized name  12
calcium  14.07
carbon_percent  3.4351
ch4_flux  0.036134573
co2_ch4_flux_units  ug C/g soil/day
co2_flux  27.24331224
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.34
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  123.6
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  17.73
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  12
host taxid  1325974
hydrogen  7.14
k_na_ca_mg_h_units  maq/100g
latitude  43.0446556
longitude  -76.6650583
magnesium  2.89
microbial_biomass_c  405.2346572
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  24.37425008
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.30462
per_gram_dry_soil_per_hour  143.6295537
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  71.29
ph  7.18
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_A12
potassium  0.43
potential_exchange_capacity  24.87
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -1.699759165
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.492709564
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  27.24331224
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.12
sample type  wetland soil
sodium  0.33
soil_nh4  36.07026773
soil_no3  0.403470556
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  36.47373829
texture_125  14.652952
texture_2  6.266338
texture_20  10.84988
texture_200  15.008777
texture_2000  1.823302
texture_63  12.595227
texture_630  28.918106
texture_6300  0
texture_6point3  9.885417
tot_org_carb_percent  3.0787
total n  19.47614664
total_carbon_percent  3.367
total_inorganic_carbon_percent  0.2886
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546237
sra-submission  ERA678275
sra-study  ERP016583
sra-sample  ERS1265709
sra-experiment  ERX1617007
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T12:06:50Z
dateModified 2021-08-21T13:02:31Z
datePublished 2016-07-24T00:00:00Z