home > biosample > SAMEA4354261
identifier SAMEA4354261
type biosample
sameAs
sra-sample  ERS1265710
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
ENA-CHECKLIST  ERC000011
External Id  SAMEA4354261
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:54Z
INSDC last update  2016-07-23T06:54:21Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.13
anonymized name  13
calcium  6.52
carbon_percent  2.2572
ch4_flux  0.042958552
co2_ch4_flux_units  ug C/g soil/day
co2_flux  24.36347283
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.11
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  295
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  8.36
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  13
host taxid  1325974
hydrogen  5.06
k_na_ca_mg_h_units  maq/100g
latitude  42.9521917
longitude  -76.4614361
magnesium  1.34
microbial_biomass_c  491.8823709
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  41.51190497
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.1914
per_gram_dry_soil_per_hour  123.3657124
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  62.29
ph  7.24
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_B1
potassium  0.34
potential_exchange_capacity  13.42
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -2.669941822
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.25038204
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  24.36347283
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.13
sample type  wetland soil
sodium  0.16
soil_nh4  29.56575155
soil_no3  0.33828091
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  29.90403246
texture_125  9.822366
texture_2  10.127071
texture_20  14.710132
texture_200  8.612186
texture_2000  2.782309
texture_63  15.164512
texture_630  23.295253
texture_6300  0
texture_6point3  15.48617
tot_org_carb_percent  1.7453
total n  3.204614236
total_carbon_percent  2.166
total_inorganic_carbon_percent  0.4206
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546238
sra-submission  ERA678275
sra-study  ERP016583
sra-sample  ERS1265710
sra-experiment  ERX1617008
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T12:06:50Z
dateModified 2021-08-21T13:02:31Z
datePublished 2016-07-24T00:00:00Z