home > biosample > SAMEA4354262
identifier SAMEA4354262
type biosample
sameAs
sra-sample  ERS1265711
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
ENA-CHECKLIST  ERC000011
External Id  SAMEA4354262
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:54Z
INSDC last update  2016-07-23T06:54:21Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.14
anonymized name  14
calcium  4.49
carbon_percent  0.29724
ch4_flux  0.020561492
co2_ch4_flux_units  ug C/g soil/day
co2_flux  5.225530603
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.051
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  111.8
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  5.73
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  14
host taxid  1325974
hydrogen  4.62
k_na_ca_mg_h_units  maq/100g
latitude  44.143059
longitude  -75.866135
magnesium  0.92
microbial_biomass_c  133.8062427
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  1.414096854
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.07989
per_gram_dry_soil_per_hour  1.371569266
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  55.36
ph  7.03
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_B2
potassium  0.24
potential_exchange_capacity  10.35
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -0.005989623
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.087572092
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  5.225530603
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.14
sample type  wetland soil
sodium  0.08
soil_nh4  1.546614225
soil_no3  0.251891568
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  1.798505793
texture_125  8.952321
texture_2  4.883159
texture_20  11.999611
texture_200  7.767047
texture_2000  20.447784
texture_63  9.894485
texture_630  25.707027
texture_6300  0
texture_6point3  10.348567
tot_org_carb_percent  0.2954
total n  1.738609559
total_carbon_percent  0.314
total_inorganic_carbon_percent  0.0186
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546239
sra-submission  ERA678275
sra-study  ERP016583
sra-sample  ERS1265711
sra-experiment  ERX1617009
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T12:06:51Z
dateModified 2021-08-21T13:02:31Z
datePublished 2016-07-24T00:00:00Z