home > biosample > SAMEA4354263
identifier SAMEA4354263
type biosample
sameAs
sra-sample  ERS1265712
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
ENA-CHECKLIST  ERC000011
External Id  SAMEA4354263
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:54Z
INSDC last update  2016-07-23T06:54:21Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.15
anonymized name  15
calcium  10.7
carbon_percent  1.9948
ch4_flux  0.022119872
co2_ch4_flux_units  ug C/g soil/day
co2_flux  13.6163689
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.183
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  352.7
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  13.23
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  15
host taxid  1325974
hydrogen  6.18
k_na_ca_mg_h_units  maq/100g
latitude  42.781593
longitude  -74.542625
magnesium  2.2
microbial_biomass_c  592.6024339
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  20.00939408
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.17976
per_gram_dry_soil_per_hour  163.1839321
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  68.15
ph  6.86
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_B3
potassium  0.24
potential_exchange_capacity  19.41
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  1.228640718
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.153882275
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  13.6163689
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.15
sample type  wetland soil
sodium  0.08
soil_nh4  11.74522707
soil_no3  0.319163779
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  12.06439085
texture_125  12.347777
texture_2  8.301167
texture_20  14.34851
texture_200  11.571118
texture_2000  0.474998
texture_63  15.976481
texture_630  23.386406
texture_6300  0
texture_6point3  13.593544
tot_org_carb_percent  1.8691
total n  23.73647767
total_carbon_percent  1.935
total_inorganic_carbon_percent  0.0657
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546240
sra-submission  ERA678275
sra-study  ERP016583
sra-sample  ERS1265712
sra-experiment  ERX1617010
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T12:06:51Z
dateModified 2021-08-21T13:02:31Z
datePublished 2016-07-24T00:00:00Z