home > biosample > SAMEA4354265
identifier SAMEA4354265
type biosample
sameAs
sra-sample  ERS1265714
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
ENA-CHECKLIST  ERC000011
External Id  SAMEA4354265
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:22Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.16
anonymized name  16
calcium  7.9
carbon_percent  2.019
ch4_flux  0.056670608
co2_ch4_flux_units  ug C/g soil/day
co2_flux  29.22240448
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.11
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  111.8
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  9.93
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  16
host taxid  1325974
hydrogen  11.58
k_na_ca_mg_h_units  maq/100g
latitude  44.143059
longitude  -75.866135
magnesium  1.62
microbial_biomass_c  618.2628654
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  49.66627942
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.21929
per_gram_dry_soil_per_hour  524.9815664
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  46.16
ph  5.98
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_B4
potassium  0.28
potential_exchange_capacity  21.51
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  0.115377823
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.901164798
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  29.22240448
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.16
sample type  wetland soil
sodium  0.12
soil_nh4  10.26014213
soil_no3  0.438467612
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  10.69860974
texture_125  5.806359
texture_2  10.483428
texture_20  26.908361
texture_200  3.576885
texture_2000  1.680454
texture_63  18.151178
texture_630  11.435431
texture_6300  0
texture_6point3  21.957903
tot_org_carb_percent  1.9285
total n  11.85238797
total_carbon_percent  1.973
total_inorganic_carbon_percent  0.0443
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546242
sra-submission  ERA678275
sra-study  ERP016583
sra-sample  ERS1265714
sra-experiment  ERX1617012
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T12:06:51Z
dateModified 2021-08-21T13:02:31Z
datePublished 2016-07-24T00:00:00Z