home > biosample > SAMEA4354271
identifier SAMEA4354271
type biosample
sameAs
sra-sample  ERS1265720
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
ENA-CHECKLIST  ERC000011
External Id  SAMEA4354271
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:22Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.1B3
anonymized name  1B3
calcium  14.15
carbon_percent  2.6554
ch4_flux  Missing: Not provided
co2_ch4_flux_units  ug C/g soil/day
co2_flux  Missing: Not provided
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  Missing: Not provided
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  146
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  15.83
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  1B3
host taxid  1325974
hydrogen  6.52
k_na_ca_mg_h_units  maq/100g
latitude  42.9280667
longitude  -76.8585361
magnesium  1.34
microbial_biomass_c  71.70977813
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  2.495048709
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.08584
per_gram_dry_soil_per_hour  2.91
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  100
ph  Missing: Not provided
ph method  H2O
ph_cacl2  7.38
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_F4
potassium  0.29
potential_exchange_capacity  15.83
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -0.039450929
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  -0.002658492
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  5.034906577
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.1B3
sample type  wetland soil
sodium  0.05
soil_nh4  0.664299078
soil_no3  0.288825686
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  0.953124764
texture_125  Missing: Not replaced
texture_2  Missing: Not replaced
texture_20  Missing: Not replaced
texture_200  Missing: Not replaced
texture_2000  Missing: Not replaced
texture_63  Missing: Not replaced
texture_630  Missing: Not replaced
texture_6300  Missing: Not applicable
texture_6point3  Missing: Not replaced
tot_org_carb_percent  1.412
total n  0.519164545
total_carbon_percent  2.473
total_inorganic_carbon_percent  1.0611
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546248
sra-submission  ERA678275
sra-study  ERP016583
sra-sample  ERS1265720
sra-experiment  ERX1617018
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T12:06:53Z
dateModified 2021-08-21T13:02:31Z
datePublished 2016-07-24T00:00:00Z