home > biosample > SAMEA4357175
identifier SAMEA4357175
type biosample
sameAs
sra-sample　 ERS1268624
organism human oral metagenome
attributes
ENA first public　 2016-07-29
ENA last update　 2016-07-27
ENA-CHECKLIST　 ERC000011
External Id　 SAMEA4357175
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-29T17:01:14Z
INSDC last update　 2016-07-27T07:18:58Z
INSDC status　 public
Submitter Id　 qiita_sid_2024:2024.birth.MNIH01UP.BFF10S.O
adult_infant　 adult
age　 21
age unit　 years
altitude　 0
anonymized name　 MNIH01UP
assigned_from_geo　 true
bmi　 19.22768787
body habitat　 UBERON:oral cavity
body product　 UBERON:saliva
body site　 UBERON:mouth
bp_dia　 70
bp_sys　 100
collection_timestamp　 03/06/2013
comments　 No vaginal swabs due to heavy bleeding
common name　 human oral metagenome
compliance　 88.54
country　 Tanzania: GAZ
date extracted　 10.02.13
date_delivery　 03.04.13
days_on_yogurt　 96
days_rcvd_yogurt　 85
depth　 0
dna_extracted　 true
dob　 03.13.92
elevation　 1147
env biome　 dense settlement biome
env feature　 hospital
env matter　 saliva
env package　 host-associated
env_material　 saliva
fetal_hb　 Missing: Not recorded
fetal_movement_24h　 Missing: Not recorded
fetal_presentation　 Missing: Not recorded
first_day_yogurt　 11.14.12
fundal_size　 Missing: Not recorded
gestation_time　 Missing: Not recorded
has_extracted_data　 true
has_physical_specimen　 true
head_circumference_2　 Missing: Not recorded
head_circumfrence_1　 34
head_circumfrence_2　 nan
height or length　 1.58
hemoglobin　 74
history_cong　 Missing: Not recorded
history_sub_fert　 Missing: Not recorded
hiv　 nan
host common name　 human
host scientific name　 Homo sapiens
host subject id　 MNIH01UP
host taxid　 9606
ideal_weight　 MIssing: Not provided
infant_alive_deceased　 alive
last_period　 MIssing: Not provided
latitude　 2.75
length_infant_1　 46
length_infant_2　 MIssing: Not provided
lims　 BFF10S
live births　 MIssing: Not provided
living_children　 MIssing: Not provided
longitude　 32.75
malaria　 2
molar_preg　 MIssing: Not provided
muac_infant_1　 8.5
muac_infant_2　 MIssing: Not provided
muac_mm　 232
nausea　 MIssing: Not provided
norm_fetal_mov　 MIssing: Not provided
nourishment_status_group　 undernourished_probiotic
nugent score　 MIssing: Not provided
ob_complications　 MIssing: Not provided
other_ob_history　 MIssing: Not provided
perc_dev　 MIssing: Not provided
physical samp avail now　 true
physical_location　 UWO
physical_specimen_location　 UWO
physical_specimen_remaining　 false
place_delivery　 5
prev_pregnancies　 MIssing: Not provided
public　 false
pulse　 78
required_sample_info_status　 completed
resp_rate　 16
sample name　 qiita_sid_2024:2024.birth.MNIH01UP.BFF10S.O
sample type　 saliva
sex　 female
sex_infant_1　 female
spon_abortions　 MIssing: Not provided
still_births　 MIssing: Not provided
stool_parasite　 1
syph　 MIssing: Not provided
time_delivery　 MIssing: Not provided
tot_mass　 48
urine_bilirubin　 0
urine_blood　 50
urine_haemolysis　 false
urine_ketone　 0
urine_leukocyte　 75
urine_nitrite　 0
urine_ph　 8
urine_protein　 30
urine_spec_grav　 1.015
urine_sugar　 0
urine_urobilinogen　 0
vag_delivery　 MIssing: Not provided
vaginal_csection　 2
vaginal_ph　 MIssing: Not provided
weight_infant_1　 2.5
well location　 H7
well_plate　 D
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14941
sra-run　 ERR1550094
sra-submission　 ERA678400
sra-study　 ERP016621
sra-sample　 ERS1268624
sra-experiment　 ERX1620864
distribution JSONJSON-LD
Download
biosample_set.xml.gz　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-30T09:06:56Z
dateModified 2021-08-21T13:04:44Z
datePublished 2016-07-29T00:00:00Z