home > biosample > SAMEA4368978
identifier SAMEA4368978
type biosample
sameAs
sra-sample  ERS1280427
organism soil metagenome
attributes
ENA first public  2016-08-05
ENA last update  2016-08-05
ENA-CHECKLIST  ERC000011
External Id  SAMEA4368978
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-08-05T17:05:35Z
INSDC last update  2016-08-05T00:26:20Z
INSDC status  public
Submitter Id  qiita_sid_1031:1031.CHRA3
altitude  0
annual_season_precpt  2530
annual_season_temp  10.3
anonymized name  CHRA3
assigned_from_geo  true
collection_timestamp  6/30/11
common name  soil metagenome
country  GAZ:United States of America
cur_land_use  tree cover
cur_vegetation  Alnus rubra
depth  0-0.15
dna_extracted  true
drainage_class  well
elevation  322
env biome  coniferous forest biome
env feature  forest soil
env matter  soil
env package  soil
env_material  soil
extracted DNA avail now  true
fire  about 25 years prior to sampling
geo loc name  USA:OR,Cascade Head
host subject id  CHRA3
latitude  45.04
location  Cascade Head
longitude  -123.89
microbial biomass  820
microbial_biomass_meth  Chloroform fumigation-extraction
microbial_biomass_unit  mg C per kg
ph  3.6
ph_meth  H2O 6:1 water:soil
physical_specimen_location  LBNL
physical_specimen_remaining  true
public  true
required_sample_info_status  completed
sample name  qiita_sid_1031:1031.CHRA3
sample type  Soil
sample_progress  sequenced (16S)
sieving  true
soil type  Histic Epiaquands
soil_type_meth  US Taxonomy
store_cond  frozen -20 C
tot_n_meth  combustion
tot_nitro  9.2
tot_nitro_unit  grams nitrogen per kg
tot_org_c_meth  combustion
tot_org_carb  144
tree_cover  red alder
water_content_soil  1.004
water_content_soil_meth  gravimetric
water_content_soil_unit  grams H2O per gram
properties 
{...}
dbXrefs
bioproject  PRJEB15055
sra-run  ERR1558767
sra-submission  ERA681928
sra-study  ERP016746
sra-sample  ERS1280427
sra-experiment  ERX1629523
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-08-06T12:06:37Z
dateModified 2021-08-21T13:09:18Z
datePublished 2016-08-05T00:00:00Z