home > biosample > SAMEA4368979
identifier SAMEA4368979
type biosample
sameAs
sra-sample  ERS1280428
organism soil metagenome
attributes
ENA first public  2016-08-05
ENA last update  2016-08-05
ENA-CHECKLIST  ERC000011
External Id  SAMEA4368979
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-08-05T17:05:35Z
INSDC last update  2016-08-05T00:26:20Z
INSDC status  public
Submitter Id  qiita_sid_1031:1031.HJDF.1
altitude  0
annual_season_precpt  2370
annual_season_temp  8.7
anonymized name  HJDF1
assigned_from_geo  true
collection_timestamp  6/23/11
common name  soil metagenome
country  GAZ:United States of America
cur_land_use  tree cover
cur_vegetation  Pseudostuga menziesii
depth  0-0.15
dna_extracted  true
drainage_class  well
elevation  641
env biome  coniferous forest biome
env feature  forest soil
env matter  soil
env package  soil
env_material  soil
extracted DNA avail now  true
fire  about 25 years prior to sampling
geo loc name  USA:OR,HJ Andrews
host subject id  HJDF.1
latitude  44.23
location  HJ Andrews
longitude  -122.19
microbial biomass  468
microbial_biomass_meth  Chloroform fumigation-extraction
microbial_biomass_unit  mg C per kg
ph  5
ph_meth  H2O 6:1 water:soil
physical_specimen_location  LBNL
physical_specimen_remaining  true
public  true
required_sample_info_status  completed
sample name  qiita_sid_1031:1031.HJDF.1
sample type  Soil
sample_progress  sequenced (16S)
sieving  true
soil type  Typic Hapludands
soil_type_meth  US Taxonomy
store_cond  frozen -20 C
tot_n_meth  combustion
tot_nitro  2.7
tot_nitro_unit  grams nitrogen per kg
tot_org_c_meth  combustion
tot_org_carb  90
tree_cover  Douglas fir
water_content_soil  0.559
water_content_soil_meth  gravimetric
water_content_soil_unit  grams H2O per gram
properties 
{...}
dbXrefs
bioproject  PRJEB15055
sra-run  ERR1558768
sra-submission  ERA681928
sra-study  ERP016746
sra-sample  ERS1280428
sra-experiment  ERX1629524
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-08-06T12:06:37Z
dateModified 2021-08-21T13:09:18Z
datePublished 2016-08-05T00:00:00Z