home > biosample > SAMEA4379916
identifier SAMEA4379916
type biosample
sameAs
sra-sample  ERS1291365
organism bird metagenome
attributes
ENA first public  2016-08-17
ENA last update  2016-08-16
ENA-CHECKLIST  ERC000011
External Id  SAMEA4379916
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-08-17T17:01:11Z
INSDC last update  2016-08-16T03:26:03Z
INSDC status  public
Submitter Id  qiita_sid_1098:1098.AMF.F124
altitude  0
anonymized name  fecal.AMF-F124.2013
assigned_from_geo  true
biological_specimen  Tachycineta bicolor
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
collection_timestamp  06/08/2010
cornell_id  769
depth  0
dna_extracted  true
egg_id  I-26
elevation  1624.1
emp_id  feces.NY.2010.769
env biome  temperate forest biome
env feature  animal-associated habitat
env matter  feces
env package  host-associated
env_material  feces
geo loc name  USA
has_physical_specimen  true
host common name  tree swallow
host scientific name  Tachycineta bicolor
host subject id  fecal.AMF-F124.2013
host taxid  72873
latitude  42.502888
longitude  -76.43735799999999
misc_param  Every sample represents 10 seconds of swabbing. In the case of nest samples, collectors were instructed to swab all areas of the nest cup (not the wooden nestbox that the nest cup is resting in). And for egg samples, all eggs present were swabbed for a total of 10 seconds regardless of how many eggs were present.
nest id  CU2B114
physical_specimen_location  Cornell
physical_specimen_remaining  false
public  true
required_sample_info_status  completed
sample name  qiita_sid_1098:1098.AMF.F124
sample type  feces
sample_code_1  2
sample_code_2  4
site  CU 2
site id  NY
sort  1105
sort_juanma  1105
state  NY
state_year  NY_2010
time collected  Missing: Not provided
year  2010
properties 
{...}
dbXrefs
bioproject  PRJEB15144
sra-run  ERR1580701
sra-submission  ERA689218
sra-study  ERP016851
sra-sample  ERS1291365
sra-experiment  ERX1651347
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-08-19T08:10:11Z
dateModified 2021-08-21T13:11:33Z
datePublished 2016-08-17T00:00:00Z