home > biosample > SAMEA4380549
identifier SAMEA4380549
type biosample
sameAs
sra-sample  ERS1291998
organism bird metagenome
attributes
ENA first public  2016-08-17
ENA last update  2016-08-16
ENA-CHECKLIST  ERC000011
External Id  SAMEA4380549
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-08-17T17:01:11Z
INSDC last update  2016-08-16T03:26:19Z
INSDC status  public
Submitter Id  qiita_sid_1098:1098.egg.NS.2009.592
altitude  0
anonymized name  egg.NS.2009.592
assigned_from_geo  true
biological_specimen  Tachycineta bicolor
body habitat  UBERON:egg
body product  UBERON:fertilized egg
body site  UBERON:egg shell
collection_timestamp  05/29/2009
cornell_id  592
depth  0
dna_extracted  true
egg_id  G 139
elevation  1624.1
emp_id  egg.NS.2009.592
env biome  temperate forest biome
env feature  nest of egg
env matter  egg
env package  host-associated
env_material  egg
geo loc name  Canada
has_physical_specimen  true
host common name  tree swallow
host scientific name  Tachycineta bicolor
host subject id  egg.NS.2009.592
host taxid  72873
latitude  45.108613899999995
longitude  -64.50267779999999
misc_param  Every sample represents 10 seconds of swabbing. In the case of nest samples, collectors were instructed to swab all areas of the nest cup (not the wooden nestbox that the nest cup is resting in). And for egg samples, all eggs present were swabbed for a total of 10 seconds regardless of how many eggs were present.
nest id  219 W
physical_specimen_location  Cornell
physical_specimen_remaining  false
public  true
required_sample_info_status  completed
sample name  qiita_sid_1098:1098.egg.NS.2009.592
sample type  egg
sample_code_1  1
sample_code_2  1
site  Kings
site id  NS
sort  223
sort_anna  274
sort_juanma  223
state  NS
state_year  NS_2009
time collected  Missing: Not provided
year  2009
properties 
{...}
dbXrefs
bioproject  PRJEB15144
sra-run  ERR1581334
sra-submission  ERA689218
sra-study  ERP016851
sra-sample  ERS1291998
sra-experiment  ERX1651980
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-08-19T08:11:31Z
dateModified 2021-08-21T13:11:55Z
datePublished 2016-08-17T00:00:00Z