home > biosample > SAMEA4380672
identifier SAMEA4380672
type biosample
sameAs
sra-sample  ERS1292121
organism bird metagenome
attributes
ENA first public  2016-08-17
ENA last update  2016-08-16
ENA-CHECKLIST  ERC000011
External Id  SAMEA4380672
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-08-17T17:01:12Z
INSDC last update  2016-08-16T03:26:22Z
INSDC status  public
Submitter Id  qiita_sid_1098:1098.egg.TN.2009.568.712616
altitude  0
anonymized name  egg.TN.2009.568
assigned_from_geo  true
biological_specimen  Tachycineta bicolor
body habitat  UBERON:egg
body product  UBERON:fertilized egg
body site  UBERON:egg shell
collection_timestamp  05/04/2009
cornell_id  568
depth  0
dna_extracted  true
egg_id  G 10
elevation  1624.1
emp_id  egg.TN.2009.568
env biome  temperate forest biome
env feature  nest of egg
env matter  egg
env package  host-associated
env_material  egg
geo loc name  USA
has_physical_specimen  true
host common name  tree swallow
host scientific name  Tachycineta bicolor
host subject id  egg.TN.2009.568
host taxid  72873
latitude  35.7787333
longitude  -84.24932220000001
misc_param  Every sample represents 10 seconds of swabbing. In the case of nest samples, collectors were instructed to swab all areas of the nest cup (not the wooden nestbox that the nest cup is resting in). And for egg samples, all eggs present were swabbed for a total of 10 seconds regardless of how many eggs were present.
nest id  FL 9
physical_specimen_location  Cornell
physical_specimen_remaining  false
public  true
required_sample_info_status  completed
sample name  qiita_sid_1098:1098.egg.TN.2009.568.712616
sample type  egg
sample_code_1  2
sample_code_2  5
site id  TN
sort  858
sort_anna  49
sort_juanma  858
state  TN
state_year  TN_2009
time collected  Missing: Not provided
year  2009
properties 
{...}
dbXrefs
bioproject  PRJEB15144
sra-run  ERR1581457
sra-submission  ERA689218
sra-study  ERP016851
sra-sample  ERS1292121
sra-experiment  ERX1652103
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-08-19T08:11:42Z
dateModified 2021-08-21T13:12:01Z
datePublished 2016-08-17T00:00:00Z