home > biosample > SAMEA4380749
identifier SAMEA4380749
type biosample
sameAs
sra-sample  ERS1292198
organism bird metagenome
attributes
ENA first public  2016-08-17
ENA last update  2016-08-16
ENA-CHECKLIST  ERC000011
External Id  SAMEA4380749
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-08-17T17:01:12Z
INSDC last update  2016-08-16T03:26:24Z
INSDC status  public
Submitter Id  qiita_sid_1098:1098.egg.WI.2008.651
altitude  0
anonymized name  egg.WI.2008.651
assigned_from_geo  true
biological_specimen  Tachycineta bicolor
body habitat  UBERON:egg
body product  UBERON:fertilized egg
body site  UBERON:egg shell
collection_timestamp  05/21/2008
cornell_id  651
depth  0
dna_extracted  true
egg_id  G 241
elevation  1624.1
emp_id  egg.WI.2008.651
env biome  temperate forest biome
env feature  nest of egg
env matter  egg
env package  host-associated
env_material  egg
geo loc name  USA
has_physical_specimen  true
host common name  tree swallow
host scientific name  Tachycineta bicolor
host subject id  egg.WI.2008.651
host taxid  72873
latitude  43.0788306
longitude  -87.880675
misc_param  Every sample represents 10 seconds of swabbing. In the case of nest samples, collectors were instructed to swab all areas of the nest cup (not the wooden nestbox that the nest cup is resting in). And for egg samples, all eggs present were swabbed for a total of 10 seconds regardless of how many eggs were present.
nest id  BV 42
physical_specimen_location  Cornell
physical_specimen_remaining  false
public  true
required_sample_info_status  completed
sample name  qiita_sid_1098:1098.egg.WI.2008.651
sample type  egg
sample_code_1  1
sample_code_2  1
site  Ozaukee Co.
site id  WI
sort  323
sort_anna  472
sort_juanma  323
state  WI
state_year  WI_2008
time collected  12:50
year  2008
properties 
{...}
dbXrefs
bioproject  PRJEB15144
sra-run  ERR1581534
sra-submission  ERA689218
sra-study  ERP016851
sra-sample  ERS1292198
sra-experiment  ERX1652180
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-08-19T08:11:49Z
dateModified 2021-08-21T13:12:04Z
datePublished 2016-08-17T00:00:00Z