home > biosample > SAMEA4380839
identifier SAMEA4380839
type biosample
sameAs
sra-sample  ERS1292288
organism bird metagenome
attributes
ENA first public  2016-08-17
ENA last update  2016-08-16
ENA-CHECKLIST  ERC000011
External Id  SAMEA4380839
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-08-17T17:01:12Z
INSDC last update  2016-08-16T03:26:26Z
INSDC status  public
Submitter Id  qiita_sid_1098:1098.nest.AKL.2008.322.712201
altitude  0
anonymized name  nest.AKL.2008.322
assigned_from_geo  true
biological_specimen  Tachycineta bicolor
collection_timestamp  06/02/2808
cornell_id  322
depth  0
dna_extracted  true
egg_id  AK 4
elevation  1624.1
emp_id  nest.AKL.2008.322
env biome  temperate forest biome
env feature  animal-associated habitat
env matter  nest of egg
env package  host-associated
env_material  nest of egg
geo loc name  USA
has_physical_specimen  true
host common name  tree swallow
host scientific name  Tachycineta bicolor
host subject id  nest.AKL.2008.322
host taxid  72873
latitude  61.378735999999996
longitude  -143.313356
misc_param  Every sample represents 10 seconds of swabbing. In the case of nest samples, collectors were instructed to swab all areas of the nest cup (not the wooden nestbox that the nest cup is resting in). And for egg samples, all eggs present were swabbed for a total of 10 seconds regardless of how many eggs were present.
nest id  LL 12
physical_specimen_location  Cornell
physical_specimen_remaining  false
public  true
required_sample_info_status  completed
sample name  qiita_sid_1098:1098.nest.AKL.2008.322.712201
sample type  nest of egg
sample_code_1  3
sample_code_2  7
site  Long Lake
site id  AKL
sort  1322
sort_anna  509
sort_juanma  376
state  AK
state_year  AK_2008
time collected  Missing: Not provided
year  2008
properties 
{...}
dbXrefs
bioproject  PRJEB15144
sra-run  ERR1581624
sra-submission  ERA689218
sra-study  ERP016851
sra-sample  ERS1292288
sra-experiment  ERX1652270
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-08-19T08:11:57Z
dateModified 2021-08-21T13:12:06Z
datePublished 2016-08-17T00:00:00Z