home > biosample > SAMEA4535109
identifier SAMEA4535109
type biosample
sameAs
sra-sample　 ERS1434288
organism soil metagenome
attributes
ENA first public　 2016-11-06
ENA last update　 2017-12-04
ENA-CHECKLIST　 ERC000022
External Id　 SAMEA4535109
INSDC center alias　 Cornell University
INSDC center name　 Cornell University
INSDC first public　 2016-11-06T17:14:37Z
INSDC last update　 2017-12-04T09:19:16Z
INSDC status　 public
Submitter Id　 SL-16S-REF-AB-2
adaptor sequence　 cgtatcgcctccctcgcgccatcag
climatic_zone　 Dfc, Boreal cool summer
collection date　 2007-07-15
common name　 pyrotag library
environment (biome)　 forest
environment (feature)　 forest
environment (material)　 soil
environmental package　 soil
geographic location (country and/or sea)　 Canada
geographic location (depth)　 21.7
geographic location (elevation)　 1050
geographic location (latitude)　 52.2
geographic location (longitude)　 -121.55
harvesting treatment　 REF
investigation type　 mimarks-survey
mean_annual_temperatuere_celsius　 4.1
multiplex identifiers　 TCACTCATAC
pcr primers　 acgggcggtgtgtRc
project name　 Skulow Lake Genomic Survey
sample name　 SL-16S-REF-AB-2
sample weight for DNA extraction　 0.5
sequencing method　 454
soil environmental package　 soil
soil_classification　 Orthic Gray Luvisols
target gene　 16S rRNA
target subfragment　 V6-V8
tree_cover　 Lodgepole pine
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB12501
sra-run　 ERR1720626
sra-submission　 ERA757846
sra-study　 ERP013987
sra-sample　 ERS1434288
sra-experiment　 ERX1790578
distribution JSONJSON-LD
Download
biosample_set.xml.gz　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-11-11T15:09:58Z
dateModified 2021-08-21T16:44:31Z
datePublished 2016-11-06T00:00:00Z