home > biosample > SAMEA4670555
identifier SAMEA4670555
type biosample
sameAs
sra-sample  ERS2491168
organism human gut metagenome
attributes
ENA first public  2018-05-19
ENA last update  2018-05-19
ENA-CHECKLIST  ERC000011
External Id  SAMEA4670555
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2018-05-19T17:02:54Z
INSDC last update  2018-05-19T16:46:48Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000047278
acid_reflux  I do not have this condition
acne medication  No
acne_medication_otc  No
add_adhd  I do not have this condition
age cat  20s
age years  29
age_corrected  29
alcohol consumption  Yes
alcohol_frequency  Rarely (a few times/month)
alcohol_types  Unspecified
alcohol_types_beercider  Yes
alcohol_types_red_wine  Yes
alcohol_types_sour_beers  Yes
alcohol_types_spiritshard_alcohol  Yes
alcohol_types_unspecified  No
alcohol_types_white_wine  Yes
allergic to i have no food allergies that i know of  Yes
allergic_to  Unspecified
allergic_to_other  No
allergic_to_peanuts  No
allergic_to_shellfish  No
allergic_to_tree_nuts  No
allergic_to_unspecified  No
alzheimers  I do not have this condition
anonymized name  47278
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  No
artificial_sweeteners  Never
asd  Unspecified
assigned_from_geo  Yes
autoimmune  I do not have this condition
birth year  1987
bmi  23.11
bmi_cat  Normal
bmi_corrected  23.11
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Unspecified
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  Yes
cdiff  I do not have this condition
census_region  West
chickenpox  Yes
clinical condition  I do not have this condition
collection date  4/15/16
collection month  April
collection season  Spring
collection time  8:00
collection_timestamp  4/15/16 8:00
consume_animal_products_abx  Yes
contraceptive  No
cosmetics_frequency  Rarely (a few times/month)
country  USA
country of birth  United States
country_residence  United States
csection  No
deodorant_use  I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia  Unspecified
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dna_extracted  Yes
dog  Yes
dominant hand  I am right handed
drinking_water_source  Well
drinks_per_session  3-Feb
economic_region  Far West
elevation  804.6
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Regularly (3-5 times/week)
exercise_location  Both
fed_as_infant  Primarily breast milk
fermented_plant_frequency  Daily
flossing_frequency  Regularly (3-5 times/week)
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency  Rarely (less than once/week)
fruit_frequency  Regularly (3-5 times/week)
fungal_overgrowth  I do not have this condition
geo loc name  USA:WA
gluten  No
height cm  187
height_units  centimeters
high_fat_red_meat_frequency  Regularly (3-5 times/week)
homecooked_meals_frequency  Daily
host common name  human
host subject id  d4cb96d6750e392ec05e2be9856c9ab7e36b6010300e7412807c83628ae0da79654dc071385da88e2f865d9ed33f04d808a48e30ad91cd804278c973bce522c8
host taxid  9606
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  6 months
latitude  46.7
level_of_education  Bachelor's degree
liver_disease  I do not have this condition
livingwith  Yes
longitude  -117.3
lowgrain_diet_type  Unspecified
lung disease  I do not have this condition
meat_eggs_frequency  Daily
mental_illness  No
mental_illness_type  Unspecified
migraine  I do not have this condition
milk_cheese_frequency  Daily
milk_substitute_frequency  Rarely (less than once/week)
multivitamin  No
nail_biter  No
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  Yes
non_food_allergies_sun  No
non_food_allergies_unspecified  No
olive_oil  Daily
one_liter_of_water_a_day_frequency  Daily
other_supplement_frequency  No
pets_other  Yes
physical_specimen_location  UCSDMI
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Rarely (a few times/month)
poultry_frequency  Regularly (3-5 times/week)
pregnant  No
prepared_meals_frequency  Rarely (less than once/week)
probiotic_frequency  Never
public  Yes
race  Caucasian
ready_to_eat_meals_frequency  Rarely (less than once/week)
red_meat_frequency  Regularly (3-5 times/week)
roommates  More than three
roommates_in_study  Yes
salted_snacks_frequency  Regularly (3-5 times/week)
sample name  qiita_sid_10317:10317.000047278
sample type  Stool
seafood_frequency  Rarely (less than once/week)
seasonal_allergies  No
sex  male
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  8 or more hours
smoking_frequency  Rarely (a few times/month)
softener  No
specialized_diet  Unspecified
state  WA
subset_age  true
subset_antibiotic_history  true
subset_bmi  true
subset_diabetes  true
subset_healthy  true
subset_ibd  true
sugar_sweetened_drink_frequency  Rarely (less than once/week)
sugary_sweets_frequency  Regularly (3-5 times/week)
survey_id  952310d5a7d62b76
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  Yes
types_of_plants  21 to 30
vegetable_frequency  Daily
vitamin_b_supplement_frequency  Rarely (a few times/month)
vitamin_d_supplement_frequency  Never
vivid_dreams  Regularly (3-5 times/week)
weight kg  81
weight_change  Remained stable
weight_units  kilograms
whole_eggs  Regularly (3-5 times/week)
whole_grain_frequency  Regularly (3-5 times/week)
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2587826
sra-submission  ERA1489869
sra-study  ERP012803
sra-sample  ERS2491168
sra-experiment  ERX2604102
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-07-03T17:43:28Z
dateModified 2021-08-21T22:35:39Z
datePublished 2018-05-19T00:00:00Z