home > biosample > SAMEA4670556
identifier SAMEA4670556
type biosample
sameAs
sra-sample  ERS2491169
organism human oral metagenome
attributes
ENA first public  2018-05-19
ENA last update  2018-05-19
ENA-CHECKLIST  ERC000011
External Id  SAMEA4670556
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2018-05-19T17:02:54Z
INSDC last update  2018-05-19T16:46:48Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000047281
acid_reflux  I do not have this condition
acne medication  No
acne_medication_otc  No
add_adhd  I do not have this condition
age cat  30s
age years  33
age_corrected  33
alcohol consumption  Yes
alcohol_frequency  Rarely (a few times/month)
alcohol_types  Unspecified
alcohol_types_beercider  Yes
alcohol_types_red_wine  No
alcohol_types_sour_beers  No
alcohol_types_spiritshard_alcohol  No
alcohol_types_unspecified  No
alcohol_types_white_wine  No
allergic to i have no food allergies that i know of  Yes
allergic_to  Unspecified
allergic_to_other  No
allergic_to_peanuts  No
allergic_to_shellfish  No
allergic_to_tree_nuts  No
allergic_to_unspecified  No
alzheimers  I do not have this condition
anonymized name  47281
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  No
artificial_sweeteners  Never
asd  I do not have this condition
assigned_from_geo  Yes
autoimmune  I do not have this condition
birth year  1983
bmi  23.3
bmi_cat  Normal
bmi_corrected  23.3
body habitat  UBERON:oral cavity
body product  UBERON:saliva
body site  UBERON:tongue
bowel_movement_frequency  Two
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  No
cdiff  I do not have this condition
census_region  Unspecified
chickenpox  No
clinical condition  I do not have this condition
collection date  4/15/16
collection month  April
collection season  Spring
collection time  13:05
collection_timestamp  4/15/16 13:05
consume_animal_products_abx  Yes
contraceptive  No
cosmetics_frequency  Never
country  USA
country of birth  United States
country_residence  United States
csection  No
deodorant_use  I use deodorant
depression_bipolar_schizophrenia  Unspecified
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dna_extracted  Yes
dog  No
dominant hand  I am right handed
drinking_water_source  City
drinks_per_session  1
economic_region  Unspecified
elevation  Unspecified
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-oral
env_material  saliva
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Rarely (a few times/month)
exercise_location  Both
fed_as_infant  Primarily infant formula
fermented_plant_frequency  Occasionally (1-2 times/week)
flossing_frequency  Daily
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency  Occasionally (1-2 times/week)
fruit_frequency  Regularly (3-5 times/week)
fungal_overgrowth  I do not have this condition
geo loc name  USA:Unspecified
gluten  I do not eat gluten because it makes me feel bad
height cm  165
height_units  centimeters
high_fat_red_meat_frequency  Rarely (less than once/week)
homecooked_meals_frequency  Regularly (3-5 times/week)
host common name  human
host subject id  81f6529add962e593a2f8f8511c7cd372d95243502e5567f5d8ce2da9db7677e720d78a950049cd1030559266f557ce0ddf889c3c1ec983894f71d91440f89d3
host taxid  9606
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  Yes
last_move  I have lived in my current state of residence for more than a year.
last_travel  1 year
latitude  Unspecified
level_of_education  Bachelor's degree
liver_disease  I do not have this condition
livingwith  No
longitude  Unspecified
lowgrain_diet_type  Unspecified
lung disease  Diagnosed by a medical professional (doctor, physician assistant)
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  No
mental_illness_type  Unspecified
migraine  I do not have this condition
milk_cheese_frequency  Occasionally (1-2 times/week)
milk_substitute_frequency  Rarely (less than once/week)
multivitamin  No
nail_biter  No
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  No
non_food_allergies_sun  No
non_food_allergies_unspecified  Yes
olive_oil  Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency  Daily
other_supplement_frequency  No
pets_other  No
physical_specimen_location  UCSDMI
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Rarely (a few times/month)
poultry_frequency  Occasionally (1-2 times/week)
pregnant  No
prepared_meals_frequency  Occasionally (1-2 times/week)
probiotic_frequency  Rarely (a few times/month)
public  Yes
race  African American
ready_to_eat_meals_frequency  Never
red_meat_frequency  Occasionally (1-2 times/week)
roommates  One
roommates_in_study  No
salted_snacks_frequency  Occasionally (1-2 times/week)
sample name  qiita_sid_10317:10317.000047281
sample type  Mouth
seafood_frequency  Rarely (less than once/week)
seasonal_allergies  Yes
sex  female
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  7-8 hours
smoking_frequency  Never
softener  Yes
specialized_diet  Unspecified
state  Unspecified
subset_age  true
subset_antibiotic_history  true
subset_bmi  true
subset_diabetes  true
subset_healthy  true
subset_ibd  true
sugar_sweetened_drink_frequency  Regularly (3-5 times/week)
sugary_sweets_frequency  Regularly (3-5 times/week)
survey_id  2e70f37b5d936d58
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  No
types_of_plants  6 to 10
vegetable_frequency  Regularly (3-5 times/week)
vitamin_b_supplement_frequency  Never
vitamin_d_supplement_frequency  Never
vivid_dreams  Never
weight kg  63
weight_change  Remained stable
weight_units  kilograms
whole_eggs  Regularly (3-5 times/week)
whole_grain_frequency  Occasionally (1-2 times/week)
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2587827
sra-submission  ERA1489869
sra-study  ERP012803
sra-sample  ERS2491169
sra-experiment  ERX2604103
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-07-03T17:43:28Z
dateModified 2021-08-21T22:35:39Z
datePublished 2018-05-19T00:00:00Z