home > biosample > SAMEA4788184
identifier SAMEA4788184
type biosample
sameAs
sra-sample  ERS2608118
organism 408170
attributes
acid_reflux  I do not have this condition
acne_medication  No
acne_medication_otc  No
add_adhd  I do not have this condition
age_cat  60s
age_corrected  66
age_years  66
alcohol_consumption  Yes
alcohol_frequency  Regularly (3-5 times/week)
alcohol_types  Unspecified
alcohol_types_beercider  No
alcohol_types_red_wine  Yes
alcohol_types_sour_beers  No
alcohol_types_spiritshard_alcohol  No
alcohol_types_unspecified  No
alcohol_types_white_wine  Yes
allergic_to  Unspecified
allergic_to_i_have_no_food_allergies_that_i_know_of  Yes
allergic_to_other  No
allergic_to_peanuts  No
allergic_to_shellfish  No
allergic_to_tree_nuts  No
allergic_to_unspecified  No
altitude  Unknown
alzheimers  I do not have this condition
animal_age  Unknown
animal_free_text  Unknown
animal_gender  Unknown
animal_origin  Unknown
animal_type  Unknown
anonymized_name  000030452
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  No
artificial_sweeteners  Rarely (a few times/month)
asd  I do not have this condition
assigned_from_geo  Yes
autoimmune  I do not have this condition
birth_year  1951
bmi  20.19
bmi_cat  Normal
bmi_corrected  20.19
body_habitat  UBERON:feces
body_product  UBERON:feces
body_site  UBERON:feces
bowel_movement_frequency  One
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer_treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  Yes
cdiff  I do not have this condition
census_region  Unspecified
chickenpox  Yes
clinical_condition  I do not have this condition
collection_date  2018-05-29
collection_month  May
collection_season  Spring
collection_time  08:55
collection_timestamp  05/29/2018 08:55
consume_animal_products_abx  Not sure
contraceptive  No
coprophage  Unknown
cosmetics_frequency  Occasionally (1-2 times/week)
country  United Kingdom
country_of_birth  New Zealand
country_residence  United Kingdom
csection  No
deodorant_use  I use an antiperspirant
depression_bipolar_schizophrenia  Unspecified
depth  Unknown
diabetes  I do not have this condition
diabetes_type  Unspecified
diet  Unknown
diet_type  Omnivore
dna_extracted  Yes
dog  No
dominant_hand  I am left handed
drinking_water_source  City
drinks_per_session  1
economic_region  Unspecified
elevation  Unspecified
env_biome  dense settlement biome
env_feature  human-associated habitat
env_material  feces
env_package  human-gut
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Regularly (3-5 times/week)
exercise_location  Depends on the season
fed_as_infant  A mixture of breast milk and formula
fermented_plant_frequency  Never
flossing_frequency  Daily
flu_vaccine_date  Year
food_source  Unknown
food_source_human_food  Unknown
food_source_pet_store_food  Unknown
food_source_unspecified  Unknown
food_source_wild_food  Unknown
food_special  Unknown
food_special_grain_free  Unknown
food_special_organic  Unknown
food_special_unspecified  Unknown
food_type  Unknown
frozen_dessert_frequency  Rarely (less than once/week)
fruit_frequency  Regularly (3-5 times/week)
fungal_overgrowth  I do not have this condition
geo_loc_name  United Kingdom:Unspecified
gluten  No
has_physical_specimen  Unknown
height_cm  160
height_units  centimeters
high_fat_red_meat_frequency  Rarely (less than once/week)
homecooked_meals_frequency  Daily
host  Unknown
host_common_name  human
host_subject_id  7ab59baeb7dda5ebd882a98bb5da99559e216b431c27a7637c1c657949379c22919d62623474d6ea1e0917fabe3d526230c3fd62df070bfff6411f066c3fe13f
host_taxid  9606
hours_outside  Unknown
humans_free_text  Unknown
ibd  I do not have this condition
ibd_diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  1 year
latitude  Unspecified
level_of_education  Graduate or Professional degree
liver_disease  I do not have this condition
living_status  Unknown
livingwith  Yes
longitude  Unspecified
lowgrain_diet_type  Unspecified
lung_disease  I do not have this condition
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  No
mental_illness_type  Unspecified
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  No
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_schizophrenia  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  Yes
migraine  Self-diagnosed
milk_cheese_frequency  Regularly (3-5 times/week)
milk_substitute_frequency  Rarely (less than once/week)
multivitamin  No
nail_biter  No
name  Unknown
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  No
non_food_allergies_sun  No
non_food_allergies_unspecified  Yes
olive_oil  Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency  Rarely (less than once/week)
other_animals_free_text  Unknown
other_supplement_frequency  Yes
pets_other  No
pets_other_freetext  Unknown
physical_specimen_location  UCSDMI
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Regularly (3-5 times/week)
poultry_frequency  Regularly (3-5 times/week)
pregnant  No
prepared_meals_frequency  Rarely (less than once/week)
probiotic_frequency  Daily
public  Yes
qiita_empo_1  Unknown
qiita_empo_2  Unknown
qiita_empo_3  Unknown
race  Caucasian
ready_to_eat_meals_frequency  Never
red_meat_frequency  Regularly (3-5 times/week)
roommates  None
roommates_in_study  No
salted_snacks_frequency  Rarely (less than once/week)
sample_type  Stool
seafood_frequency  Occasionally (1-2 times/week)
seasonal_allergies  Yes
setting  Unknown
sex  female
sibo  I do not have this condition
skin_condition  Diagnosed by a medical professional (doctor, physician assistant)
sleep_duration  7-8 hours
smoking_frequency  Never
softener  No
specialized_diet  Unspecified
specialized_diet_exclude_dairy  No
specialized_diet_exclude_nightshades  No
specialized_diet_exclude_refined_sugars  No
specialized_diet_fodmap  No
specialized_diet_halaal  No
specialized_diet_i_do_not_eat_a_specialized_diet  Yes
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  No
state  Unspecified
subset_age  true
subset_antibiotic_history  true
subset_bmi  true
subset_diabetes  true
subset_healthy  true
subset_ibd  true
sugar_sweetened_drink_frequency  Rarely (less than once/week)
sugary_sweets_frequency  Rarely (less than once/week)
survey_id  c242951100a772de
teethbrushing_frequency  Daily
thyroid  I do not have this condition
title  American Gut Project
toilet_water_access  Unknown
tonsils_removed  No
types_of_plants  More than 30
vegetable_frequency  Daily
vioscreen_a_bev  Unknown
vioscreen_a_cal  Unknown
vioscreen_acesupot  Unknown
vioscreen_activity_level  Unknown
vioscreen_add_sug  Unknown
vioscreen_addsugar  Unknown
vioscreen_adsugtot  Unknown
vioscreen_age  Unknown
vioscreen_alanine  Unknown
vioscreen_alcohol  Unknown
vioscreen_alcohol_servings  Unknown
vioscreen_alphacar  Unknown
vioscreen_alphtoce  Unknown
vioscreen_alphtoco  Unknown
vioscreen_arginine  Unknown
vioscreen_ash  Unknown
vioscreen_aspartam  Unknown
vioscreen_aspartic  Unknown
vioscreen_avcarb  Unknown
vioscreen_bcodeid  Unknown
vioscreen_betacar  Unknown
vioscreen_betacryp  Unknown
vioscreen_betaine  Unknown
vioscreen_betatoco  Unknown
vioscreen_biochana  Unknown
vioscreen_bmi  Unknown
vioscreen_caffeine  Unknown
vioscreen_calcium  Unknown
vioscreen_calcium_avg  Unknown
vioscreen_calcium_dose  Unknown
vioscreen_calcium_freq  Unknown
vioscreen_calcium_from_dairy_servings  Unknown
vioscreen_calcium_servings  Unknown
vioscreen_calories  Unknown
vioscreen_carbo  Unknown
vioscreen_cholest  Unknown
vioscreen_choline  Unknown
vioscreen_clac9t11  Unknown
vioscreen_clat10c12  Unknown
vioscreen_copper  Unknown
vioscreen_coumest  Unknown
vioscreen_cystine  Unknown
vioscreen_d_cheese  Unknown
vioscreen_d_milk  Unknown
vioscreen_d_tot_soym  Unknown
vioscreen_d_total  Unknown
vioscreen_d_yogurt  Unknown
vioscreen_daidzein  Unknown
vioscreen_database  Unknown
vioscreen_delttoco  Unknown
vioscreen_discfat_oil  Unknown
vioscreen_discfat_sol  Unknown
vioscreen_dob  Unknown
vioscreen_eer  Unknown
vioscreen_email  Unknown
vioscreen_erythr  Unknown
vioscreen_f_citmlb  Unknown
vioscreen_f_nj_citmlb  Unknown
vioscreen_f_nj_other  Unknown
vioscreen_f_nj_total  Unknown
vioscreen_f_other  Unknown
vioscreen_f_total  Unknown
vioscreen_fat  Unknown
vioscreen_fiber  Unknown
vioscreen_fibh2o  Unknown
vioscreen_fibinso  Unknown
vioscreen_finished  Unknown
vioscreen_fish_servings  Unknown
vioscreen_fol_deqv  Unknown
vioscreen_fol_nat  Unknown
vioscreen_fol_syn  Unknown
vioscreen_formontn  Unknown
vioscreen_fried_fish_servings  Unknown
vioscreen_fried_food_servings  Unknown
vioscreen_frt5_day  Unknown
vioscreen_frtsumm  Unknown
vioscreen_fructose  Unknown
vioscreen_fruit_servings  Unknown
vioscreen_g_nwhl  Unknown
vioscreen_g_total  Unknown
vioscreen_g_whl  Unknown
vioscreen_galactos  Unknown
vioscreen_gammtoco  Unknown
vioscreen_gender  Unknown
vioscreen_genistn  Unknown
vioscreen_glac  Unknown
vioscreen_gltc  Unknown
vioscreen_glucose  Unknown
vioscreen_glutamic  Unknown
vioscreen_glycine  Unknown
vioscreen_glycitn  Unknown
vioscreen_grams  Unknown
vioscreen_hei2010_dairy  Unknown
vioscreen_hei2010_empty_calories  Unknown
vioscreen_hei2010_fatty_acids  Unknown
vioscreen_hei2010_fruit  Unknown
vioscreen_hei2010_greens_beans  Unknown
vioscreen_hei2010_protien_foods  Unknown
vioscreen_hei2010_refined_grains  Unknown
vioscreen_hei2010_score  Unknown
vioscreen_hei2010_sea_foods_plant_protiens  Unknown
vioscreen_hei2010_sodium  Unknown
vioscreen_hei2010_veg  Unknown
vioscreen_hei2010_whole_fruit  Unknown
vioscreen_hei2010_whole_grains  Unknown
vioscreen_hei_drk_g_org_veg_leg  Unknown
vioscreen_hei_fruit  Unknown
vioscreen_hei_grains  Unknown
vioscreen_hei_meat_beans  Unknown
vioscreen_hei_milk  Unknown
vioscreen_hei_non_juice_frt  Unknown
vioscreen_hei_oils  Unknown
vioscreen_hei_sat_fat  Unknown
vioscreen_hei_score  Unknown
vioscreen_hei_sodium  Unknown
vioscreen_hei_sol_fat_alc_add_sug  Unknown
vioscreen_hei_veg  Unknown
vioscreen_hei_whl_grains  Unknown
vioscreen_height  Unknown
vioscreen_histidin  Unknown
vioscreen_inositol  Unknown
vioscreen_iron  Unknown
vioscreen_isoleuc  Unknown
vioscreen_isomalt  Unknown
vioscreen_joules  Unknown
vioscreen_juice_servings  Unknown
vioscreen_lactitol  Unknown
vioscreen_lactose  Unknown
vioscreen_legumes  Unknown
vioscreen_leucine  Unknown
vioscreen_line_gi  Unknown
vioscreen_low_fat_dairy_serving  Unknown
vioscreen_lutzeax  Unknown
vioscreen_lycopene  Unknown
vioscreen_lysine  Unknown
vioscreen_m_egg  Unknown
vioscreen_m_fish_hi  Unknown
vioscreen_m_fish_lo  Unknown
vioscreen_m_frank  Unknown
vioscreen_m_meat  Unknown
vioscreen_m_mpf  Unknown
vioscreen_m_nutsd  Unknown
vioscreen_m_organ  Unknown
vioscreen_m_poult  Unknown
vioscreen_m_soy  Unknown
vioscreen_magnes  Unknown
vioscreen_maltitol  Unknown
vioscreen_maltose  Unknown
vioscreen_mangan  Unknown
vioscreen_mannitol  Unknown
vioscreen_methhis3  Unknown
vioscreen_methion  Unknown
vioscreen_mfa141  Unknown
vioscreen_mfa161  Unknown
vioscreen_mfa181  Unknown
vioscreen_mfa201  Unknown
vioscreen_mfa221  Unknown
vioscreen_mfatot  Unknown
vioscreen_multi_calcium_avg  Unknown
vioscreen_multi_calcium_dose  Unknown
vioscreen_multivitamin  Unknown
vioscreen_multivitamin_freq  Unknown
vioscreen_natoco  Unknown
vioscreen_nccglbr  Unknown
vioscreen_nccglgr  Unknown
vioscreen_niacin  Unknown
vioscreen_niacineq  Unknown
vioscreen_nitrogen  Unknown
vioscreen_non_fried_fish_servings  Unknown
vioscreen_nutrient_recommendation  Unknown
vioscreen_omega3  Unknown
vioscreen_oxalic  Unknown
vioscreen_oxalicm  Unknown
vioscreen_pantothe  Unknown
vioscreen_pectins  Unknown
vioscreen_pfa182  Unknown
vioscreen_pfa183  Unknown
vioscreen_pfa184  Unknown
vioscreen_pfa204  Unknown
vioscreen_pfa205  Unknown
vioscreen_pfa225  Unknown
vioscreen_pfa226  Unknown
vioscreen_pfatot  Unknown
vioscreen_phenylal  Unknown
vioscreen_phosphor  Unknown
vioscreen_phytic  Unknown
vioscreen_pinitol  Unknown
vioscreen_potass  Unknown
vioscreen_procdate  Unknown
vioscreen_proline  Unknown
vioscreen_protanim  Unknown
vioscreen_protein  Unknown
vioscreen_protocol  Unknown
vioscreen_protveg  Unknown
vioscreen_questionnaire  Unknown
vioscreen_recno  Unknown
vioscreen_retinol  Unknown
vioscreen_rgrain  Unknown
vioscreen_ribofla  Unknown
vioscreen_sacchar  Unknown
vioscreen_salad_vegetable_servings  Unknown
vioscreen_satoco  Unknown
vioscreen_scf  Unknown
vioscreen_scfv  Unknown
vioscreen_selenium  Unknown
vioscreen_serine  Unknown
vioscreen_sfa100  Unknown
vioscreen_sfa120  Unknown
vioscreen_sfa140  Unknown
vioscreen_sfa160  Unknown
vioscreen_sfa170  Unknown
vioscreen_sfa180  Unknown
vioscreen_sfa200  Unknown
vioscreen_sfa220  Unknown
vioscreen_sfa40  Unknown
vioscreen_sfa60  Unknown
vioscreen_sfa80  Unknown
vioscreen_sfatot  Unknown
vioscreen_sodium  Unknown
vioscreen_sorbitol  Unknown
vioscreen_srvid  Unknown
vioscreen_starch  Unknown
vioscreen_started  Unknown
vioscreen_subject_id  Unknown
vioscreen_sucpoly  Unknown
vioscreen_sucrlose  Unknown
vioscreen_sucrose  Unknown
vioscreen_sweet_servings  Unknown
vioscreen_tagatose  Unknown
vioscreen_tfa161t  Unknown
vioscreen_tfa181t  Unknown
vioscreen_tfa182t  Unknown
vioscreen_tgrain  Unknown
vioscreen_thiamin  Unknown
vioscreen_threonin  Unknown
vioscreen_time  Unknown
vioscreen_totaltfa  Unknown
vioscreen_totcla  Unknown
vioscreen_totfolat  Unknown
vioscreen_totsugar  Unknown
vioscreen_tryptoph  Unknown
vioscreen_tyrosine  Unknown
vioscreen_user_id  Unknown
vioscreen_v_drkgr  Unknown
vioscreen_v_orange  Unknown
vioscreen_v_other  Unknown
vioscreen_v_potato  Unknown
vioscreen_v_starcy  Unknown
vioscreen_v_tomato  Unknown
vioscreen_v_total  Unknown
vioscreen_valine  Unknown
vioscreen_veg5_day  Unknown
vioscreen_vegetable_servings  Unknown
vioscreen_vegsumm  Unknown
vioscreen_visit  Unknown
vioscreen_vita_iu  Unknown
vioscreen_vita_rae  Unknown
vioscreen_vita_re  Unknown
vioscreen_vitb12  Unknown
vioscreen_vitb6  Unknown
vioscreen_vitc  Unknown
vioscreen_vitd  Unknown
vioscreen_vitd2  Unknown
vioscreen_vitd3  Unknown
vioscreen_vitd_iu  Unknown
vioscreen_vite_iu  Unknown
vioscreen_vitk  Unknown
vioscreen_water  Unknown
vioscreen_weight  Unknown
vioscreen_wgrain  Unknown
vioscreen_whole_grain_servings  Unknown
vioscreen_xylitol  Unknown
vioscreen_zinc  Unknown
vitamin_b_supplement_frequency  Regularly (3-5 times/week)
vitamin_d_supplement_frequency  Daily
vivid_dreams  Rarely (a few times/month)
weight_cat  Unknown
weight_change  Remained stable
weight_kg  51
weight_units  kilograms
whole_eggs  Occasionally (1-2 times/week)
whole_grain_frequency  Occasionally (1-2 times/week)
ENA-FIRST-PUBLIC  2018-07-13
ENA-LAST-UPDATE  2018-07-12
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2697555
sra-submission  ERA1541312
sra-study  ERP012803
sra-sample  ERS2608118
sra-experiment  ERX2711948
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-07-14T08:06:07Z
dateModified 2021-08-08T10:23:36Z
datePublished 2018-07-14T00:00:00Z