| Alias |
qiita_sid_10317:10317.000033718 |
| Description |
American Gut Project Stool sample |
| ENA checklist |
ERC000011 |
| INSDC center name |
UCSDMI |
| INSDC first public |
2018-07-13T17:03:09Z |
| INSDC last update |
2018-07-12T22:24:14Z |
| INSDC status |
public |
| SRA accession |
ERS2608121 |
| Sample Name |
ERS2608121 |
| Title |
10317.000033718 |
| acid_reflux |
Unspecified |
| acne_medication |
No |
| acne_medication_otc |
No |
| add_adhd |
I do not have this condition |
| age_cat |
40s |
| age_corrected |
46 |
| age_years |
46 |
| alcohol_consumption |
No |
| alcohol_frequency |
Never |
| alcohol_types |
Unspecified |
| alcohol_types_beercider |
No |
| alcohol_types_red_wine |
No |
| alcohol_types_sour_beers |
No |
| alcohol_types_spiritshard_alcohol |
No |
| alcohol_types_unspecified |
Yes |
| alcohol_types_white_wine |
No |
| allergic_to |
Unspecified |
| allergic_to_i_have_no_food_allergies_that_i_know_of |
Yes |
| allergic_to_other |
No |
| allergic_to_peanuts |
No |
| allergic_to_shellfish |
No |
| allergic_to_tree_nuts |
No |
| allergic_to_unspecified |
No |
| alzheimers |
I do not have this condition |
| anonymized_name |
000033718 |
| antibiotic_history |
I have not taken antibiotics in the past year. |
| appendix_removed |
No |
| artificial_sweeteners |
Never |
| asd |
I do not have this condition |
| assigned_from_geo |
Yes |
| autoimmune |
Diagnosed by a medical professional (doctor, physician assistant) |
| birth_year |
1972 |
| bmi |
27.44 |
| bmi_cat |
Overweight |
| bmi_corrected |
27.44 |
| body_habitat |
UBERON:feces |
| body_product |
UBERON:feces |
| body_site |
UBERON:feces |
| bowel_movement_frequency |
One |
| bowel_movement_quality |
I tend to have normal formed stool - Type 3 and 4 |
| breastmilk_formula_ensure |
No |
| cancer |
Unspecified |
| cancer_treatment |
Unspecified |
| cardiovascular_disease |
I do not have this condition |
| cat |
No |
| cdiff |
I do not have this condition |
| census_region |
West |
| chickenpox |
Not sure |
| clinical_condition |
I do not have this condition |
| collection_date |
2018-06-13 |
| collection_month |
June |
| collection_season |
Summer |
| collection_time |
11:25 |
| collection_timestamp |
06/13/2018 11:25 |
| consume_animal_products_abx |
No |
| contraceptive |
No |
| cosmetics_frequency |
Never |
| country |
USA |
| country_of_birth |
Turkey |
| country_residence |
United States |
| csection |
No |
| deodorant_use |
I do not use deodorant or an antiperspirant |
| depression_bipolar_schizophrenia |
Unspecified |
| diabetes |
I do not have this condition |
| diabetes_type |
Unspecified |
| diet_type |
Omnivore |
| dna_extracted |
Yes |
| dog |
No |
| dominant_hand |
I am right handed |
| drinking_water_source |
City |
| drinks_per_session |
I don't drink |
| economic_region |
Rocky Mountain |
| elevation |
1510.4 |
| env_biome |
dense settlement biome |
| env_feature |
human-associated habitat |
| env_material |
feces |
| env_package |
human-gut |
| epilepsy_or_seizure_disorder |
I do not have this condition |
| exercise_frequency |
Occasionally (1-2 times/week) |
| exercise_location |
Both |
| fed_as_infant |
Primarily breast milk |
| fermented_plant_frequency |
Regularly (3-5 times/week) |
| flossing_frequency |
Rarely (a few times/month) |
| flu_vaccine_date |
I have not gotten the flu vaccine in the past year. |
| frozen_dessert_frequency |
Rarely (less than once/week) |
| fruit_frequency |
Daily |
| fungal_overgrowth |
Self-diagnosed |
| geo_loc_name |
USA:CO |
| gluten |
I do not eat gluten because it makes me feel bad |
| height_cm |
172 |
| height_units |
centimeters |
| high_fat_red_meat_frequency |
Never |
| homecooked_meals_frequency |
Daily |
| host_common_name |
Homo sapiens |
| host_subject_id |
2fe5f745a6f1f1f7e0fc9733f2e4ec4babea5e04d55a3ada8ec23ff1a5fc25aa8caa553dbdb57816ed17602da03247fbbba1bf95d1e48c08e7b16337cfe4cfc0 |
| host_taxid |
9606 |
| ibd |
I do not have this condition |
| ibd_diagnosis |
Unspecified |
| ibd_diagnosis_refined |
Unspecified |
| ibs |
I do not have this condition |
| kidney_disease |
I do not have this condition |
| lactose |
No |
| last_move |
I have lived in my current state of residence for more than a year. |
| last_travel |
I have not been outside of my country of residence in the past year. |
| latitude |
40.5 |
| level_of_education |
Graduate or Professional degree |
| liver_disease |
I do not have this condition |
| livingwith |
Yes |
| longitude |
-105 |
| lowgrain_diet_type |
Unspecified |
| lung_disease |
I do not have this condition |
| meat_eggs_frequency |
Daily |
| mental_illness |
Unspecified |
| mental_illness_type |
Unspecified |
| mental_illness_type_anorexia_nervosa |
No |
| mental_illness_type_bipolar_disorder |
No |
| mental_illness_type_bulimia_nervosa |
No |
| mental_illness_type_depression |
No |
| mental_illness_type_ptsd_posttraumatic_stress_disorder |
No |
| mental_illness_type_schizophrenia |
No |
| mental_illness_type_substance_abuse |
No |
| mental_illness_type_unspecified |
Yes |
| migraine |
I do not have this condition |
| milk_cheese_frequency |
Daily |
| milk_substitute_frequency |
Never |
| multivitamin |
No |
| nail_biter |
Yes |
| non_food_allergies |
Unspecified |
| non_food_allergies_beestings |
No |
| non_food_allergies_drug_eg_penicillin |
No |
| non_food_allergies_pet_dander |
No |
| non_food_allergies_poison_ivyoak |
No |
| non_food_allergies_sun |
No |
| non_food_allergies_unspecified |
Yes |
| olive_oil |
Daily |
| one_liter_of_water_a_day_frequency |
Daily |
| other_supplement_frequency |
Yes |
| pets_other |
No |
| physical_specimen_location |
UCSDMI |
| physical_specimen_remaining |
Yes |
| pku |
I do not have this condition |
| pool_frequency |
Never |
| poultry_frequency |
Daily |
| pregnant |
No |
| prepared_meals_frequency |
Never |
| probiotic_frequency |
Daily |
| public |
Yes |
| race |
Caucasian |
| ready_to_eat_meals_frequency |
Never |
| red_meat_frequency |
Occasionally (1-2 times/week) |
| roommates |
Two |
| roommates_in_study |
Yes |
| salted_snacks_frequency |
Never |
| sample_type |
Stool |
| seafood_frequency |
Rarely (less than once/week) |
| seasonal_allergies |
No |
| sex |
female |
| sibo |
I do not have this condition |
| skin_condition |
I do not have this condition |
| sleep_duration |
7-8 hours |
| smoking_frequency |
Never |
| softener |
No |
| specialized_diet |
Unspecified |
| specialized_diet_exclude_dairy |
No |
| specialized_diet_exclude_nightshades |
No |
| specialized_diet_exclude_refined_sugars |
Yes |
| specialized_diet_fodmap |
No |
| specialized_diet_halaal |
No |
| specialized_diet_i_do_not_eat_a_specialized_diet |
No |
| specialized_diet_kosher |
No |
| specialized_diet_modified_paleo_diet |
No |
| specialized_diet_other_restrictions_not_described_here |
No |
| specialized_diet_paleodiet_or_primal_diet |
No |
| specialized_diet_raw_food_diet |
No |
| specialized_diet_unspecified |
No |
| specialized_diet_westenprice_or_other_lowgrain_low_processed_fo |
Yes |
| state |
CO |
| subset_age |
true |
| subset_antibiotic_history |
true |
| subset_bmi |
true |
| subset_diabetes |
true |
| subset_healthy |
true |
| subset_ibd |
true |
| sugar_sweetened_drink_frequency |
Never |
| sugary_sweets_frequency |
Never |
| survey_id |
27233b3098186be7 |
| teethbrushing_frequency |
Daily |
| thyroid |
Diagnosed by a medical professional (doctor, physician assistant) |
| title |
American Gut Project |
| tonsils_removed |
No |
| types_of_plants |
11 to 20 |
| vegetable_frequency |
Daily |
| vitamin_b_supplement_frequency |
Daily |
| vitamin_d_supplement_frequency |
Daily |
| vivid_dreams |
Never |
| weight_change |
Decreased more than 10 pounds |
| weight_kg |
81 |
| weight_units |
kilograms |
| whole_eggs |
Daily |
| whole_grain_frequency |
Occasionally (1-2 times/week) |