home > biosample > SAMEA5564457
identifier SAMEA5564457
type biosample
sameAs
sra-sample  ERS3366486
organism marine sediment metagenome
attributes
ENA first public  2019-06-09
ENA last update  2019-04-12
ENA-CHECKLIST  ERC000021
External Id  SAMEA5564457
INSDC center alias  STANFORD UNIVERSITY
INSDC center name  Stanford University
INSDC first public  2019-06-09T04:03:58Z
INSDC last update  2019-04-12T00:09:29Z
INSDC status  public
Submitter Id  PC6503-B2-0cm3cm-Rep1-WFSIP01
adapters  Forward:_TCGTCGGCAGCGTCAGATGTGTATAAGAGACAGNNMM;_Reverse:_GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGNNDD
collection date  2010-10
common name  marine_sediment_metagenome
environment (biome)  3000033
environment (feature)  00000267
environment (material)  3000033
geographic location (country and/or sea)  Pacific Ocean
geographic location (depth)  0-0.03
geographic location (elevation)  2893
geographic location (latitude)  36.613683
geographic location (longitude)  -122.435142
geographic location (region and locality)  Monterey_Canyon
investigation type  metagenome
pcr primers  Forward:_GTGYCAGCMGCCGCGGTAA;_Reverse:_CCGYCAATTYMTTTRAGTTT
project name  CornellSIP
sample name  PC6503-B2-0cm3cm-Rep1-WFSIP01
sediment environmental package  sediment
sequencing method  Illumina_MiSeq_2x250bp
target gene  16S_rRNA
target subfragment  V4_V5
properties 
{...}
dbXrefs
bioproject  PRJEB32101
sra-run  ERR3277885
sra-submission  ERA1827112
sra-study  ERP114739
sra-sample  ERS3366486
sra-experiment  ERX3304736
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2019-06-10T09:05:59Z
dateModified 2021-08-22T06:04:05Z
datePublished 2019-06-09T00:00:00Z