home > biosample > SAMEA6061084
identifier SAMEA6061084
type biosample
sameAs
sra-sample  ERS3862211
organism gut metagenome
attributes
ENA first public  2019-10-09
ENA last update  2019-10-09
ENA-CHECKLIST  ERC000015
External Id  SAMEA6061084
INSDC center alias  Centre for Translational Microbiome Research (CTMR)
INSDC center name  Centre for Translational Microbiome Research (CTMR)
INSDC first public  2019-10-09T17:06:18Z
INSDC last update  2019-10-09T10:01:26Z
INSDC status  public
Submitter Id  170512-P054_CGTACTAG-TATCCTCT
collection date  2004-06-10
environment (biome)  Human gut
environment (feature)  Sigmoid mucosa
environment (material)  Pinch biopsy
extraction_plate  27-570
gastrointestinal tract disorder  IBS (irritable-bowel syndrome)
geographic location (country and/or sea)  Sweden
geographic location (latitude)  59.34
geographic location (longitude)  18.02
geographic location (region and locality)  Stockholm
host age  41
host body mass index  19.9594
host body product  Mucosal tissue
host sex  female
host subject id  3251
human gut environmental package  human-gut
investigation type  mimarks-survey
library screening strategy  PCR amplification
project name  PopCol
sample name  170512-P054_CGTACTAG-TATCCTCT
sample storage duration  12
sample storage location  Swedish Center for Communicable Disease Control
sample storage temperature  -80
sequencing method  Illumina
sequencing run  170512
properties 
{...}
dbXrefs
bioproject  PRJEB31817
sra-run  ERR3585973
sra-submission  ERA2161055
sra-study  ERP114423
sra-sample  ERS3862211
sra-experiment  ERX3581915
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2019-10-10T09:08:39Z
dateModified 2021-08-22T09:55:00Z
datePublished 2019-10-09T00:00:00Z