home > biosample > SAMEA665728
identifier SAMEA665728
type biosample
sameAs
sra-sample  ERS041749
organism soil metagenome
attributes
ENA first public  2011-07-14
ENA last update  2018-03-09
External Id  SAMEA665728
Geographic location (country:region,area)  China: Province of Zhejiang
INSDC center alias  MPI-M
INSDC center name  Max Planck Institute for Terrestrial Microbiology
INSDC first public  2011-07-14T14:45:06Z
INSDC last update  2018-03-09T09:53:43Z
INSDC status  public
Submitter Id  China2000
collection date  Spring 2009
depth  0-30 cm
elevation  0 m.a.s.
enviornmental package  soil
environment (biome)  Baily biome: Subtropical devision
environment (feature)  soil
environment (material)  paddy field
geographic location (latitudeandlongitude)  30.08 N 121.45 E
history/flooding  seasonally flooded
investigation type  MIENS_Survey
pcr primers  Forward primer A189f: 5’- GGN GAC TGG GAC TTC TGG -3’ and reverse primer A682r: 5’- GAA SGC NGA GAA GAA SGC -3’ or forward primer A189f: 5’- GGN GAC TGG GAC TTC TGG -3’ and reverse primer mb661: 5’- CCG GMG CAA CGT CYT TAC C -3’
ph  6.4
project name  0
sample name  China2000
sequencing method  Pyrosequencing
soil taxonomic/fao classification  endogleyic stagnosol
target gene  pmoA
total nitrogen  3.81 g/kg soil
total organic carbon  32.30 g/kg soil
properties 
{...}
dbXrefs
bioproject  PRJEB2607
sra-run  ERR039008ERR039009ERR039010ERR039011
sra-submission  ERA038765
sra-study  ERP000779
sra-sample  ERS041749
sra-experiment  ERX016204ERX016205ERX016206
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2011-07-25T15:25:54Z
dateModified 2021-08-22T14:38:47Z
datePublished 2011-07-14T00:00:00Z