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identifier SAMEA665729
type biosample
sameAs
sra-sample　 ERS041748
organism soil metagenome
attributes
ENA first public　 2011-07-14
ENA last update　 2018-03-09
External Id　 SAMEA665729
Geographic location (country:region,area)　 Italy: Province of Vercelli
INSDC center alias　 MPI-M
INSDC center name　 Max Planck Institute for Terrestrial Microbiology
INSDC first public　 2011-07-14T14:45:06Z
INSDC last update　 2018-03-09T09:53:43Z
INSDC status　 public
Submitter Id　 Italy
collection date　 Spring 2009
depth　 0-30 cm
elevation　 130 m.a.s.
enviornmental package　 soil
environment (biome)　 Baily biome: Mediterranean devision
environment (feature)　 soil
environment (material)　 paddy field
geographic location (latitudeandlongitude)　 45.32 N 8.37 E
history/flooding　 seasonally flooded
investigation type　 MIENS_Survey
pcr primers　 Forward primer A189f: 5’- GGN GAC TGG GAC TTC TGG -3’ and reverse primer A682r: 5’- GAA SGC NGA GAA GAA SGC -3’ or forward primer A189f: 5’- GGN GAC TGG GAC TTC TGG -3’ and reverse primer mb661: 5’- CCG GMG CAA CGT CYT TAC C -3’
project name　 0
sample name　 Italy
sequencing method　 Pyrosequencing
target gene　 pmoA
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB2607
sra-run　 ERR039012ERR039013ERR039014ERR039015
sra-submission　 ERA038765
sra-study　 ERP000779
sra-sample　 ERS041748
sra-experiment　 ERX016208ERX016209ERX016210ERX016211
distribution JSONJSON-LD
Download
biosample_set.xml.gz　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2011-07-25T15:25:54Z
dateModified 2021-08-22T14:38:47Z
datePublished 2011-07-14T00:00:00Z