home > biosample > SAMEA6674015
identifier SAMEA6674015
type biosample
sameAs
sra-sample  ERS4423553
organism human gut metagenome
attributes
ENA first public  2020-04-14
ENA last update  2020-04-13
ENA-CHECKLIST  ERC000011
External Id  SAMEA6674015
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2020-04-14T16:28:07Z
INSDC last update  2020-04-13T18:30:03Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000003100
acid_reflux  I do not have this condition
acne medication  No
acne_medication_otc  Unspecified
add_adhd  I do not have this condition
age cat  40s
age years  42
age_corrected  42
alcohol consumption  Yes
alcohol_frequency  Occasionally (1-2 times/week)
alcohol_types_beercider  Yes
alcohol_types_red_wine  No
alcohol_types_sour_beers  No
alcohol_types_spiritshard_alcohol  No
alcohol_types_unspecified  No
alcohol_types_white_wine  No
allergic to i have no food allergies that i know of  Yes
allergic_to_other  No
allergic_to_peanuts  No
allergic_to_shellfish  No
allergic_to_tree_nuts  No
allergic_to_unspecified  No
alzheimers  I do not have this condition
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  No
artificial_sweeteners  Never
asd  I do not have this condition
autoimmune  I do not have this condition
birth year  1975
bmi_cat  Obese
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  One
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  No
cdiff  I do not have this condition
census_region  Unspecified
chickenpox  Yes
clinical condition  I do not have this condition
collection month  July
collection season  Summer
collection time  13:35
collection_date_only  2017-07-26
consume_animal_products_abx  No
contraceptive  No
cosmetics_frequency  Rarely (a few times/month)
country  USA
country of birth  United States
country_residence  United States
csection  No
deodorant_use  I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia  Unspecified
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dog  No
dominant hand  I am right handed
drinking_water_source  City
drinks_per_session  1
economic_region  Unspecified
elevation  Unspecified
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Occasionally (1-2 times/week)
exercise_location  Depends on the season
fed_as_infant  A mixture of breast milk and formula
fermented_plant_frequency  Rarely (less than once/week)
flossing_frequency  Rarely (a few times/month)
flu_vaccine_date  Year
frozen_dessert_frequency  Occasionally (1-2 times/week)
fruit_frequency  Rarely (less than once/week)
fungal_overgrowth  I do not have this condition
geo loc name  USA:Unspecified
gluten  No
height cm  165
high_fat_red_meat_frequency  Rarely (less than once/week)
homecooked_meals_frequency  Daily
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  3 months
latitude  Unspecified
level_of_education  Graduate or Professional degree
liver_disease  I do not have this condition
livingwith  Yes
longitude  Unspecified
lowgrain_diet_type  Unspecified
lung disease  Diagnosed by a medical professional (doctor, physician assistant)
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  No
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  No
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_schizophrenia  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  Yes
migraine  Diagnosed by a medical professional (doctor, physician assistant)
milk_cheese_frequency  Daily
milk_substitute_frequency  Never
multivitamin  No
nail_biter  Yes
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  Yes
non_food_allergies_sun  No
non_food_allergies_unspecified  No
olive_oil  Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency  Regularly (3-5 times/week)
other_supplement_frequency  No
pets_other  No
pku  I do not have this condition
pool_frequency  Occasionally (1-2 times/week)
poultry_frequency  Rarely (less than once/week)
pregnant  No
prepared_meals_frequency  Rarely (less than once/week)
probiotic_frequency  Never
race  Caucasian
ready_to_eat_meals_frequency  Rarely (less than once/week)
red_meat_frequency  Occasionally (1-2 times/week)
roommates_in_study  Yes
salted_snacks_frequency  Occasionally (1-2 times/week)
sample name  qiita_sid_10317:10317.000003100
sample type  Stool
seafood_frequency  Never
seasonal_allergies  No
sex  female
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  8 or more hours
smoking_frequency  Never
softener  No
specialized_diet_exclude_dairy  No
specialized_diet_exclude_nightshades  No
specialized_diet_exclude_refined_sugars  No
specialized_diet_fodmap  No
specialized_diet_halaal  No
specialized_diet_i_do_not_eat_a_specialized_diet  Yes
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  No
state  Unspecified
subset_age  true
subset_antibiotic_history  true
subset_bmi  false
subset_diabetes  true
subset_healthy  false
subset_ibd  true
sugar_sweetened_drink_frequency  Never
sugary_sweets_frequency  Regularly (3-5 times/week)
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  No
types_of_plants  11 to 20
vegetable_frequency  Regularly (3-5 times/week)
vitamin_b_supplement_frequency  Never
vitamin_d_supplement_frequency  Occasionally (1-2 times/week)
vivid_dreams  Never
weight kg  105
weight_change  Remained stable
whole_eggs  Rarely (less than once/week)
whole_grain_frequency  Occasionally (1-2 times/week)
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR4018879
sra-submission  ERA2421685
sra-study  ERP012803
sra-sample  ERS4423553
sra-experiment  ERX4020267
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2020-04-18T15:10:32Z
dateModified 2021-08-22T14:42:22Z
datePublished 2020-04-14T00:00:00Z