home > biosample > SAMEA6674469
identifier SAMEA6674469
type biosample
sameAs
sra-sample  ERS4424007
organism human gut metagenome
attributes
ENA first public  2020-04-14
ENA last update  2020-04-13
ENA-CHECKLIST  ERC000011
External Id  SAMEA6674469
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2020-04-14T16:28:06Z
INSDC last update  2020-04-13T20:26:15Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000069373
acid_reflux  I do not have this condition
acne medication  No
acne_medication_otc  Yes
add_adhd  I do not have this condition
age cat  20s
age years  23
age_corrected  23
alcohol consumption  Yes
alcohol_frequency  Regularly (3-5 times/week)
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  No
artificial_sweeteners  Never
asd  I do not have this condition
autoimmune  I do not have this condition
birth year  1994
bmi  19.14
bmi_cat  Normal
bmi_corrected  19.14
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Two
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  No
cdiff  I do not have this condition
census_region  Midwest
chickenpox  Yes
clinical condition  I do not have this condition
collection month  December
collection season  Winter
collection time  11:05
collection_date_only  2017-12-27
collection_timestamp  12/27/2017 11:05
consume_animal_products_abx  Yes
contraceptive  Yes, I am taking the pill
cosmetics_frequency  Daily
country  USA
country of birth  United States
country_residence  United States
csection  No
deodorant_use  I use deodorant
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dog  Yes
dominant hand  I am right handed
drinking_water_source  City
drinks_per_session  2-Jan
economic_region  Plains
elevation  364.5
env package  human-gut
env_material  feces
exercise_frequency  Daily
exercise_location  Outdoors
fed_as_infant  Primarily breast milk
fermented_plant_frequency  Rarely (less than once/week)
flossing_frequency  Never
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency  Occasionally (1-2 times/week)
fruit_frequency  Daily
fungal_overgrowth  I do not have this condition
geo loc name  USA:NE
gluten  No
height cm  165
high_fat_red_meat_frequency  Rarely (less than once/week)
homecooked_meals_frequency  Daily
host subject id  f9a737a479c4da3eb9c2e4defc0ee537dafd50ddc43303b6db602ca33d5c9a3760e92edaef3b49f3333c958ce4f9da13f1bb6f362f7901ed8f8c5ec0d7665ab6
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  No
last_move  Within the past 6 months
last_travel  I have not been outside of my country of residence in the past year.
latitude  40.8
level_of_education  Some graduate school or professional
liver_disease  I do not have this condition
livingwith  No
longitude  -96.7
lung disease  I do not have this condition
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  No
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  No
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  Yes
migraine  I do not have this condition
milk_cheese_frequency  Daily
milk_substitute_frequency  Never
multivitamin  No
nail_biter  Yes
olive_oil  Daily
one_liter_of_water_a_day_frequency  Occasionally (1-2 times/week)
other_supplement_frequency  Yes
pets_other  No
pool_frequency  Never
poultry_frequency  Occasionally (1-2 times/week)
pregnant  No
prepared_meals_frequency  Occasionally (1-2 times/week)
probiotic_frequency  Regularly (3-5 times/week)
race  Caucasian
ready_to_eat_meals_frequency  Rarely (less than once/week)
red_meat_frequency  Regularly (3-5 times/week)
roommates  One
roommates_in_study  Yes
salted_snacks_frequency  Daily
sample name  qiita_sid_10317:10317.000069373
sample type  Stool
seafood_frequency  Never
seasonal_allergies  No
sex  female
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  8 or more hours
smoking_frequency  Never
softener  No
specialized_diet_exclude_dairy  No
specialized_diet_exclude_refined_sugars  No
specialized_diet_fodmap  No
specialized_diet_i_do_not_eat_a_specialized_diet  Yes
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  No
state  NE
subset_age  true
subset_antibiotic_history  true
subset_bmi  true
subset_diabetes  true
subset_healthy  true
subset_ibd  true
sugar_sweetened_drink_frequency  Never
sugary_sweets_frequency  Daily
survey_id  503b39d15f0cc6d2
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  No
types_of_plants  11 to 20
vegetable_frequency  Regularly (3-5 times/week)
vitamin_b_supplement_frequency  Occasionally (1-2 times/week)
vitamin_d_supplement_frequency  Occasionally (1-2 times/week)
vivid_dreams  Rarely (a few times/month)
weight kg  52
weight_change  Remained stable
whole_eggs  Rarely (less than once/week)
whole_grain_frequency  Daily
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR4019366ERR5532528
sra-submission  ERA2421689ERA3690463
sra-study  ERP012803
sra-sample  ERS4424007
sra-experiment  ERX4020754ERX5312935
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2020-04-18T15:12:42Z
dateModified 2021-08-22T14:42:42Z
datePublished 2020-04-14T00:00:00Z