home > biosample > SAMEA6675640
identifier SAMEA6675640
type biosample
sameAs
sra-sample  ERS4425176
organism human gut metagenome
attributes
ENA first public  2020-04-14
ENA last update  2020-04-14
ENA-CHECKLIST  ERC000011
External Id  SAMEA6675640
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2020-04-14T16:28:05Z
INSDC last update  2020-04-14T15:33:52Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000059970
acid_reflux  Diagnosed by a medical professional (doctor, physician assistant)
acne medication  No
acne_medication_otc  No
add_adhd  I do not have this condition
age cat  40s
age years  44
age_corrected  44
alcohol consumption  Yes
alcohol_frequency  Occasionally (1-2 times/week)
alzheimers  I do not have this condition
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  Yes
artificial_sweeteners  Never
asd  I do not have this condition
autoimmune  I do not have this condition
birth year  1974
bmi_cat  Overweight
bowel_movement_frequency  One
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  No
cdiff  I do not have this condition
census_region  Unspecified
chickenpox  Yes
clinical condition  I do not have this condition
collection month  July
collection season  Summer
collection time  09:25
collection_date_only  2018-07-27
consume_animal_products_abx  No
contraceptive  No
cosmetics_frequency  Never
country  United Kingdom
country of birth  United Kingdom
country_residence  United Kingdom
csection  No
deodorant_use  I do not use deodorant or an antiperspirant
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore but do not eat red meat
dog  No
dominant hand  I am right handed
drinking_water_source  City
drinks_per_session  1-2
economic_region  Unspecified
elevation  Unspecified
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Occasionally (1-2 times/week)
exercise_location  Outdoors
fed_as_infant  Primarily breast milk
fermented_plant_frequency  Occasionally (1-2 times/week)
flossing_frequency  Daily
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency  Never
fruit_frequency  Rarely (less than once/week)
fungal_overgrowth  Diagnosed by an alternative medicine practitioner
geo loc name  United Kingdom:Unspecified
gluten  No
height cm  170
high_fat_red_meat_frequency  Rarely (less than once/week)
homecooked_meals_frequency  Regularly (3-5 times/week)
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  Diagnosed by an alternative medicine practitioner
kidney_disease  I do not have this condition
lactose  No
last_move  Within the past 3 months
last_travel  3 months
latitude  Unspecified
level_of_education  Bachelor's degree
liver_disease  I do not have this condition
livingwith  No
longitude  Unspecified
lung disease  Diagnosed by a medical professional (doctor, physician assistant)
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  Yes
migraine  I do not have this condition
milk_cheese_frequency  Occasionally (1-2 times/week)
milk_substitute_frequency  Regularly (3-5 times/week)
multivitamin  No
nail_biter  Yes
olive_oil  Occasionally (1-2 times/week)
one_liter_of_water_a_day_frequency  Occasionally (1-2 times/week)
other_supplement_frequency  Yes
pets_other  No
pku  I do not have this condition
pool_frequency  Rarely (a few times/month)
poultry_frequency  Rarely (less than once/week)
pregnant  No
prepared_meals_frequency  Rarely (less than once/week)
probiotic_frequency  Occasionally (1-2 times/week)
race  Caucasian
ready_to_eat_meals_frequency  Never
red_meat_frequency  Rarely (less than once/week)
roommates  One
roommates_in_study  No
salted_snacks_frequency  Rarely (less than once/week)
sample name  qiita_sid_10317:10317.000059970
seafood_frequency  Occasionally (1-2 times/week)
seasonal_allergies  No
sex  male
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  6-7 hours
smoking_frequency  Never
softener  No
specialized_diet_exclude_dairy  No
specialized_diet_exclude_nightshades  No
specialized_diet_exclude_refined_sugars  No
specialized_diet_fodmap  No
specialized_diet_halaal  No
specialized_diet_i_do_not_eat_a_specialized_diet  No
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  Yes
state  Unspecified
subset_age  true
subset_antibiotic_history  true
subset_bmi  true
subset_diabetes  true
subset_healthy  true
subset_ibd  true
sugar_sweetened_drink_frequency  Never
sugary_sweets_frequency  Rarely (less than once/week)
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  No
types_of_plants  11 to 20
vegetable_frequency  Daily
vitamin_b_supplement_frequency  Rarely (a few times/month)
vitamin_d_supplement_frequency  Never
vivid_dreams  Rarely (a few times/month)
weight kg  77
weight_change  Remained stable
whole_eggs  Occasionally (1-2 times/week)
whole_grain_frequency  Rarely (less than once/week)
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR4020382
sra-submission  ERA2421996
sra-study  ERP012803
sra-sample  ERS4425176
sra-experiment  ERX4021770
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2020-04-18T15:14:21Z
dateModified 2021-08-22T14:43:52Z
datePublished 2020-04-14T00:00:00Z