home > biosample > SAMEA7686047
identifier SAMEA7686047
type biosample
sameAs
sra-sample　 ERS5442579
organism human gut metagenome
attributes
ENA first public　 2020-12-03
ENA last update　 2020-12-03
ENA-CHECKLIST　 ERC000011
External Id　 SAMEA7686047
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2020-12-03T17:07:14Z
INSDC last update　 2020-12-03T16:01:59Z
INSDC status　 public
Submitter Id　 qiita_sid_10317:10317.000052108
acid_reflux　 I do not have this condition
acne medication　 No
acne_medication_otc　 No
add_adhd　 I do not have this condition
age cat　 40s
alcohol consumption　 Yes
alcohol_frequency　 Rarely (a few times/month)
alcohol_types_beercider　 false
alcohol_types_red_wine　 false
alcohol_types_sour_beers　 false
alcohol_types_spiritshard_alcohol　 true
alcohol_types_unspecified　 false
alcohol_types_white_wine　 true
allergic to i have no food allergies that i know of　 false
allergic_to_other　 true
allergic_to_peanuts　 false
allergic_to_shellfish　 false
allergic_to_tree_nuts　 false
allergic_to_unspecified　 false
alzheimers　 I do not have this condition
antibiotic_history　 I have not taken antibiotics in the past year.
appendix_removed　 No
artificial_sweeteners　 Rarely (a few times/month)
asd　 I do not have this condition
autoimmune　 Unspecified
birth year　 1970
bmi　 26.1
bowel_movement_frequency　 Unspecified
bowel_movement_quality　 I tend to be constipated (have difficulty passing stool) - Type 1 and 2
breastmilk_formula_ensure　 No
cancer　 I do not have this condition
cancer treatment　 Unspecified
cardiovascular_disease　 I do not have this condition
cat　 No
cdiff　 I do not have this condition
chickenpox　 Not sure
clinical condition　 I do not have this condition
consume_animal_products_abx　 Yes
contraceptive　 No
cosmetics_frequency　 Rarely (a few times/month)
country of birth　 Taiwan, Province of China
country_residence　 United States
covid_chronic_conditions_any_autoimmune_disease　 false
covid_chronic_conditions_arthritis　 false
covid_chronic_conditions_asthma_or_other_lung_problems　 false
covid_chronic_conditions_heart_problems　 false
covid_chronic_conditions_hypertension　 false
covid_chronic_conditions_immune_disorder　 false
covid_chronic_conditions_kidney_problems　 false
covid_chronic_conditions_seasonal_allergies　 false
covid_chronic_conditions_serious_stomach_or_bowel_problems　 false
covid_family_members_fallen_ill_physically　 false
covid_family_members_hospitalized　 false
covid_family_members_lost_job　 false
covid_family_members_none_of_the_above　 false
covid_family_members_put_into_self_quarantine_with_symptoms　 false
covid_family_members_put_into_self_quarantine_without_symptoms_eg_due_to_possible_exposure　 false
covid_family_members_reduced_ability_to_earn_money　 false
covid_family_members_unspecified　 false
covid_happened_to_you_fallen_ill_physically　 false
covid_happened_to_you_lost_job　 false
covid_happened_to_you_none_of_the_above　 false
covid_happened_to_you_put_into_self_quarantine_with_symptoms　 false
covid_happened_to_you_put_into_self_quarantine_without_symptoms_eg_due_to_possible_exposure　 false
covid_happened_to_you_reduced_ability_to_earn_money　 false
covid_happened_to_you_unspecified　 false
covid_likely_exposure_no　 false
covid_likely_exposure_yes_someone_with_positive_test　 false
covid_likely_exposure_yes_someone_with_possible_symptoms_but_no_diagnosis_by_doctor　 false
covid_symptoms_chest_pain_or_tightness_in_chest　 false
covid_symptoms_cough　 false
covid_symptoms_diarrhea　 false
covid_symptoms_fatigue　 false
covid_symptoms_fever　 false
covid_symptoms_lack_of_appetitie　 false
covid_symptoms_loss_of_taste_or_smell　 false
covid_symptoms_nausea　 false
covid_symptoms_other　 false
covid_symptoms_shortness_of_breath　 false
covid_symptoms_sore_throat　 false
covid_symptoms_unspecified　 false
csection　 No
deodorant_use　 Not sure, but I use some form of deodorant/antiperspirant
diabetes　 I do not have this condition
diabetes type　 Unspecified
diet type　 Omnivore
dog　 No
dominant hand　 I am right handed
drinking_water_source　 City
drinks_per_session　 1
epilepsy_or_seizure_disorder　 I do not have this condition
exercise_frequency　 Occasionally (1-2 times/week)
exercise_location　 Outdoors
fed_as_infant　 A mixture of breast milk and formula
fermented_consumed_beer　 false
fermented_consumed_cider　 false
fermented_consumed_cottage_cheese　 false
fermented_consumed_fermented_beansmisonatto　 false
fermented_consumed_fermented_breadsourdoughinjera　 false
fermented_consumed_fermented_fish　 false
fermented_consumed_fermented_tofu　 false
fermented_consumed_kefir_milk　 false
fermented_consumed_kefir_water　 false
fermented_consumed_kimchi　 true
fermented_consumed_kombucha　 true
fermented_consumed_mead　 false
fermented_consumed_other　 false
fermented_consumed_pickled_vegetables　 false
fermented_consumed_sauerkraut　 false
fermented_consumed_sour_creamcreme_fraiche　 true
fermented_consumed_tempeh　 false
fermented_consumed_unspecified　 false
fermented_consumed_wine　 false
fermented_consumed_yogurtlassi　 true
fermented_frequency　 Occasionally (1-2 times/week)
fermented_increased　 Month
fermented_plant_frequency　 Occasionally (1-2 times/week)
fermented_produce_commercial_beer　 false
fermented_produce_commercial_unspecified　 true
fermented_produce_personal_beer　 false
fermented_produce_personal_cider　 false
fermented_produce_personal_cottage_cheese　 false
fermented_produce_personal_fermented_beansmisonatto　 false
fermented_produce_personal_kefir_milk　 false
fermented_produce_personal_kefir_water　 false
fermented_produce_personal_kimchi　 false
fermented_produce_personal_pickled_vegetables　 false
fermented_produce_personal_sauerkraut　 false
fermented_produce_personal_sour_creamcreme_fraiche　 false
fermented_produce_personal_tempeh　 false
fermented_produce_personal_unspecified　 true
fermented_produce_personal_wine　 false
fermented_produce_personal_yogurtlassi　 false
flossing_frequency　 Occasionally (1-2 times/week)
flu_vaccine_date　 6 months
food_source_human_food　 not provided
food_source_pet_store_food　 not provided
food_source_unspecified　 not provided
food_source_wild_food　 not provided
food_special_grain_free　 not provided
food_special_organic　 not provided
food_special_unspecified　 not provided
frozen_dessert_frequency　 Rarely (less than once/week)
fruit_frequency　 Rarely (less than once/week)
fungal_overgrowth　 Unspecified
gluten　 I do not eat gluten because it makes me feel bad
height cm　 165
high_fat_red_meat_frequency　 Occasionally (1-2 times/week)
homecooked_meals_frequency　 Regularly (3-5 times/week)
ibd　 I do not have this condition
ibd_diagnosis_refined　 Unspecified
ibs　 I do not have this condition
kidney_disease　 I do not have this condition
lactose　 No
last_move　 Within the past year
last_travel　 Month
level_of_education　 Bachelor's degree
liver_disease　 Diagnosed by a medical professional (doctor, physician assistant)
livingwith　 Yes
lung disease　 I do not have this condition
meat_eggs_frequency　 Regularly (3-5 times/week)
mental_illness　 No
mental_illness_type_anorexia_nervosa　 false
mental_illness_type_bipolar_disorder　 false
mental_illness_type_bulimia_nervosa　 false
mental_illness_type_depression　 false
mental_illness_type_ptsd_post_traumatic_stress_disorder　 false
mental_illness_type_schizophrenia　 false
mental_illness_type_substance_abuse　 false
mental_illness_type_unspecified　 true
migraine　 I do not have this condition
milk_cheese_frequency　 Regularly (3-5 times/week)
milk_substitute_frequency　 Regularly (3-5 times/week)
multivitamin　 No
nail_biter　 Yes
non_food_allergies_beestings　 false
non_food_allergies_drug_eg_penicillin　 false
non_food_allergies_pet_dander　 true
non_food_allergies_poison_ivyoak　 false
non_food_allergies_sun　 true
non_food_allergies_unspecified　 false
olive_oil　 Occasionally (1-2 times/week)
one_liter_of_water_a_day_frequency　 Regularly (3-5 times/week)
other_supplement_frequency　 Yes
pets_other　 No
pku　 I do not have this condition
pool_frequency　 Unspecified
poultry_frequency　 Occasionally (1-2 times/week)
pregnant　 No
prepared_meals_frequency　 Occasionally (1-2 times/week)
probiotic_frequency　 Regularly (3-5 times/week)
race　 Asian or Pacific Islander
ready_to_eat_meals_frequency　 Occasionally (1-2 times/week)
red_meat_frequency　 Regularly (3-5 times/week)
roommates_in_study　 No
salted_snacks_frequency　 Regularly (3-5 times/week)
sample name　 qiita_sid_10317:10317.000052108
seafood_frequency　 Occasionally (1-2 times/week)
seasonal_allergies　 Yes
sibo　 Unspecified
skin_condition　 Diagnosed by a medical professional (doctor, physician assistant)
sleep_duration　 6-7 hours
smoking_frequency　 Never
softener　 Yes
specialized_diet_exclude_dairy　 false
specialized_diet_exclude_nightshades　 false
specialized_diet_exclude_refined_sugars　 false
specialized_diet_fodmap　 false
specialized_diet_halaal　 false
specialized_diet_i_do_not_eat_a_specialized_diet　 false
specialized_diet_kosher　 false
specialized_diet_modified_paleo_diet　 true
specialized_diet_other_restrictions_not_described_here　 false
specialized_diet_paleo_diet_or_primal_diet　 true
specialized_diet_raw_food_diet　 false
specialized_diet_unspecified　 false
specialized_diet_weston_price_or_other_low_grain_low_processed_food_diet　 false
sugar_sweetened_drink_frequency　 Rarely (less than once/week)
sugary_sweets_frequency　 Rarely (less than once/week)
teethbrushing_frequency　 Daily
thyroid　 I do not have this condition
tonsils_removed　 No
types_of_plants　 6 to 10
vegetable_frequency　 Regularly (3-5 times/week)
vitamin_b_supplement_frequency　 Rarely (a few times/month)
vitamin_d_supplement_frequency　 Rarely (a few times/month)
vivid_dreams　 Rarely (a few times/month)
weight kg　 71
weight_change　 Remained stable
whole_eggs　 Regularly (3-5 times/week)
whole_grain_frequency　 Rarely (less than once/week)
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB11419
sra-run　 ERR4914376
sra-submission　 ERA3186336
sra-study　 ERP012803
sra-sample　 ERS5442579
sra-experiment　 ERX4781138
distribution JSONJSON-LD
Download
biosample_set.xml.gz　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2020-12-06T10:16:46Z
dateModified 2021-08-23T00:07:54Z
datePublished 2020-12-03T00:00:00Z