| Alias |
qiita_sid_10317:10317.000023646 |
| Description |
American Gut Project Mouth Sample |
| ENA checklist |
ERC000011 |
| INSDC center name |
UCSDMI |
| INSDC first public |
2017-02-19T17:01:50Z |
| INSDC last update |
2017-08-06T17:04:27Z |
| INSDC status |
public |
| SRA accession |
ERS1563385 |
| Sample Name |
ERS1563385 |
| Title |
10317.000023646 |
| acid_reflux |
I do not have this condition |
| acne_medication |
false |
| acne_medication_otc |
false |
| add_adhd |
I do not have this condition |
| age_cat |
70+ |
| age_corrected |
75 |
| age_years |
75 |
| alcohol_consumption |
true |
| alcohol_frequency |
Daily |
| alcohol_types |
Not provided |
| alcohol_types_beercider |
No |
| alcohol_types_red_wine |
false |
| alcohol_types_sour_beers |
false |
| alcohol_types_spiritshard_alcohol |
false |
| alcohol_types_unspecified |
false |
| alcohol_types_white_wine |
true |
| allergic_to |
Not provided |
| allergic_to_i_have_no_food_allergies_that_i_know_of |
true |
| allergic_to_other |
false |
| allergic_to_peanuts |
false |
| allergic_to_shellfish |
false |
| allergic_to_tree_nuts |
false |
| allergic_to_unspecified |
false |
| alzheimers |
Diagnosed by an alternative medicine practitioner |
| anonymized_name |
000023646 |
| antibiotic_history |
I have not taken antibiotics in the past year. |
| appendix_removed |
false |
| artificial_sweeteners |
Never |
| asd |
I do not have this condition |
| autoimmune |
I do not have this condition |
| birth_year |
1941 |
| bmi |
22.1 |
| bmi_cat |
Normal |
| bmi_corrected |
22.1 |
| body_habitat |
UBERON:oral cavity |
| body_product |
UBERON:saliva |
| body_site |
UBERON:tongue |
| bowel_movement_frequency |
Two |
| bowel_movement_quality |
I tend to have normal formed stool - Type 3 and 4 |
| breastmilk_formula_ensure |
false |
| cancer |
I do not have this condition |
| cancer_treatment |
Not provided |
| cardiovascular_disease |
I do not have this condition |
| cat |
false |
| cdiff |
I do not have this condition |
| census_region |
Not provided |
| chickenpox |
Yes |
| clinical_condition |
I do not have this condition |
| collection_date |
2016-09-13 |
| collection_month |
September |
| collection_season |
Fall |
| collection_time |
10:05 |
| collection_timestamp |
2016-09-13 10:05 |
| consume_animal_products_abx |
Not sure |
| contraceptive |
No |
| cosmetics_frequency |
Daily |
| country |
Australia |
| country_of_birth |
Australia |
| country_residence |
Australia |
| csection |
false |
| deodorant_use |
I do not use deodorant or an antiperspirant |
| depression_bipolar_schizophrenia |
Not provided |
| diabetes |
I do not have this condition |
| diabetes_type |
Not provided |
| diet_type |
Omnivore |
| dna_extracted |
true |
| dog |
false |
| dominant_hand |
I am right handed |
| drinking_water_source |
City |
| drinks_per_session |
1 |
| economic_region |
Not provided |
| elevation |
79.3 |
| env_biome |
dense settlement biome |
| env_feature |
human-associated habitat |
| env_material |
saliva |
| env_package |
human-oral |
| epilepsy_or_seizure_disorder |
I do not have this condition |
| exercise_frequency |
Occasionally (1-2 times/week) |
| exercise_location |
Outdoors |
| fed_as_infant |
Primarily breast milk |
| fermented_plant_frequency |
Never |
| flossing_frequency |
Daily |
| flu_vaccine_date |
6 months |
| frozen_dessert_frequency |
Regularly (3-5 times/week) |
| fruit_frequency |
Daily |
| fungal_overgrowth |
I do not have this condition |
| geo_loc_name |
Australia:VIC |
| gluten |
No |
| has_physical_specimen |
true |
| height_cm |
170 |
| height_units |
centimeters |
| high_fat_red_meat_frequency |
Rarely (less than once/week) |
| homecooked_meals_frequency |
Daily |
| host_common_name |
Homo sapiens |
| host_subject_id |
06145da99db756a52e74bdbf39f28c6a5c04326222f1e250b400400ceb03c473b968b57f91c7533c8c2b1e0d5f7a7c79e49f454b1c351afdce490b8503cac033 |
| host_taxid |
9606 |
| ibd |
I do not have this condition |
| ibd_diagnosis |
Not provided |
| ibd_diagnosis_refined |
Not provided |
| ibs |
I do not have this condition |
| kidney_disease |
I do not have this condition |
| lactose |
false |
| last_move |
I have lived in my current state of residence for more than a year. |
| last_travel |
I have not been outside of my country of residence in the past year. |
| latitude |
-37.7 |
| level_of_education |
Some college or technical school |
| liver_disease |
I do not have this condition |
| livingwith |
Yes |
| longitude |
145.1 |
| lowgrain_diet_type |
Not provided |
| lung_disease |
I do not have this condition |
| meat_eggs_frequency |
Regularly (3-5 times/week) |
| mental_illness |
false |
| mental_illness_type |
Not provided |
| mental_illness_type_anorexia_nervosa |
false |
| mental_illness_type_bipolar_disorder |
false |
| mental_illness_type_bulimia_nervosa |
false |
| mental_illness_type_depression |
false |
| mental_illness_type_ptsd_posttraumatic_stress_disorder |
false |
| mental_illness_type_schizophrenia |
false |
| mental_illness_type_substance_abuse |
false |
| mental_illness_type_unspecified |
true |
| migraine |
I do not have this condition |
| milk_cheese_frequency |
Daily |
| milk_substitute_frequency |
Daily |
| multivitamin |
false |
| nail_biter |
false |
| non_food_allergies |
Not provided |
| non_food_allergies_beestings |
true |
| non_food_allergies_drug_eg_penicillin |
false |
| non_food_allergies_pet_dander |
false |
| non_food_allergies_poison_ivyoak |
false |
| non_food_allergies_sun |
false |
| non_food_allergies_unspecified |
false |
| olive_oil |
Regularly (3-5 times/week) |
| one_liter_of_water_a_day_frequency |
Daily |
| other_supplement_frequency |
true |
| pets_other |
false |
| physical_specimen_location |
UCSDMI |
| physical_specimen_remaining |
true |
| pku |
I do not have this condition |
| pool_frequency |
Never |
| poultry_frequency |
Regularly (3-5 times/week) |
| pregnant |
false |
| prepared_meals_frequency |
Rarely (less than once/week) |
| probiotic_frequency |
Never |
| public |
true |
| race |
Caucasian |
| ready_to_eat_meals_frequency |
Never |
| red_meat_frequency |
Occasionally (1-2 times/week) |
| roommates_in_study |
No |
| salted_snacks_frequency |
Rarely (less than once/week) |
| sample_type |
Mouth |
| seafood_frequency |
Rarely (less than once/week) |
| seasonal_allergies |
Yes |
| sex |
female |
| sibo |
I do not have this condition |
| skin_condition |
I do not have this condition |
| sleep_duration |
7-8 hours |
| smoking_frequency |
Never |
| softener |
No |
| specialized_diet |
Not provided |
| specialized_diet_exclude_dairy |
No |
| specialized_diet_exclude_nightshades |
No |
| specialized_diet_exclude_refined_sugars |
No |
| specialized_diet_fodmap |
No |
| specialized_diet_halaal |
No |
| specialized_diet_i_do_not_eat_a_specialized_diet |
No |
| specialized_diet_kosher |
No |
| specialized_diet_modified_paleo_diet |
No |
| specialized_diet_other_restrictions_not_described_here |
No |
| specialized_diet_paleodiet_or_primal_diet |
No |
| specialized_diet_raw_food_diet |
No |
| specialized_diet_unspecified |
Yes |
| specialized_diet_westenprice_or_other_lowgrain_low_processed_fo |
No |
| state |
VIC |
| subset_age |
false |
| subset_antibiotic_history |
true |
| subset_bmi |
true |
| subset_diabetes |
true |
| subset_healthy |
false |
| subset_ibd |
true |
| sugar_sweetened_drink_frequency |
Rarely (less than once/week) |
| sugary_sweets_frequency |
Regularly (3-5 times/week) |
| survey_id |
afc4fd65612a39bb |
| teethbrushing_frequency |
Daily |
| thyroid |
Diagnosed by a medical professional (doctor, physician assistant) |
| title |
American Gut Project |
| tonsils_removed |
false |
| types_of_plants |
21 to 30 |
| vegetable_frequency |
Daily |
| vioscreen_a_bev |
Not provided |
| vioscreen_a_cal |
Not provided |
| vioscreen_acesupot |
Not provided |
| vioscreen_activity_level |
Not provided |
| vioscreen_add_sug |
Not provided |
| vioscreen_addsugar |
Not provided |
| vioscreen_adsugtot |
Not provided |
| vioscreen_age |
Not provided |
| vioscreen_alanine |
Not provided |
| vioscreen_alcohol |
Not provided |
| vioscreen_alcohol_servings |
Not provided |
| vioscreen_alphacar |
Not provided |
| vioscreen_alphtoce |
Not provided |
| vioscreen_alphtoco |
Not provided |
| vioscreen_arginine |
Not provided |
| vioscreen_ash |
Not provided |
| vioscreen_aspartam |
Not provided |
| vioscreen_aspartic |
Not provided |
| vioscreen_avcarb |
Not provided |
| vioscreen_bcodeid |
Not provided |
| vioscreen_betacar |
Not provided |
| vioscreen_betacryp |
Not provided |
| vioscreen_betaine |
Not provided |
| vioscreen_betatoco |
Not provided |
| vioscreen_biochana |
Not provided |
| vioscreen_bmi |
Not provided |
| vioscreen_caffeine |
Not provided |
| vioscreen_calcium |
Not provided |
| vioscreen_calcium_avg |
Not provided |
| vioscreen_calcium_dose |
Not provided |
| vioscreen_calcium_freq |
Not provided |
| vioscreen_calcium_from_dairy_servings |
Not provided |
| vioscreen_calcium_servings |
Not provided |
| vioscreen_calories |
Not provided |
| vioscreen_carbo |
Not provided |
| vioscreen_cholest |
Not provided |
| vioscreen_choline |
Not provided |
| vioscreen_clac9t11 |
Not provided |
| vioscreen_clat10c12 |
Not provided |
| vioscreen_copper |
Not provided |
| vioscreen_coumest |
Not provided |
| vioscreen_cystine |
Not provided |
| vioscreen_d_cheese |
Not provided |
| vioscreen_d_milk |
Not provided |
| vioscreen_d_tot_soym |
Not provided |
| vioscreen_d_total |
Not provided |
| vioscreen_d_yogurt |
Not provided |
| vioscreen_daidzein |
Not provided |
| vioscreen_database |
Not provided |
| vioscreen_delttoco |
Not provided |
| vioscreen_discfat_oil |
Not provided |
| vioscreen_discfat_sol |
Not provided |
| vioscreen_dob |
Not provided |
| vioscreen_eer |
Not provided |
| vioscreen_email |
Not provided |
| vioscreen_erythr |
Not provided |
| vioscreen_f_citmlb |
Not provided |
| vioscreen_f_nj_citmlb |
Not provided |
| vioscreen_f_nj_other |
Not provided |
| vioscreen_f_nj_total |
Not provided |
| vioscreen_f_other |
Not provided |
| vioscreen_f_total |
Not provided |
| vioscreen_fat |
Not provided |
| vioscreen_fiber |
Not provided |
| vioscreen_fibh2o |
Not provided |
| vioscreen_fibinso |
Not provided |
| vioscreen_finished |
Not provided |
| vioscreen_fish_servings |
Not provided |
| vioscreen_fol_deqv |
Not provided |
| vioscreen_fol_nat |
Not provided |
| vioscreen_fol_syn |
Not provided |
| vioscreen_formontn |
Not provided |
| vioscreen_fried_fish_servings |
Not provided |
| vioscreen_fried_food_servings |
Not provided |
| vioscreen_frt5_day |
Not provided |
| vioscreen_frtsumm |
Not provided |
| vioscreen_fructose |
Not provided |
| vioscreen_fruit_servings |
Not provided |
| vioscreen_g_nwhl |
Not provided |
| vioscreen_g_total |
Not provided |
| vioscreen_g_whl |
Not provided |
| vioscreen_galactos |
Not provided |
| vioscreen_gammtoco |
Not provided |
| vioscreen_gender |
Not provided |
| vioscreen_genistn |
Not provided |
| vioscreen_glac |
Not provided |
| vioscreen_gltc |
Not provided |
| vioscreen_glucose |
Not provided |
| vioscreen_glutamic |
Not provided |
| vioscreen_glycine |
Not provided |
| vioscreen_glycitn |
Not provided |
| vioscreen_grams |
Not provided |
| vioscreen_hei2010_dairy |
Not provided |
| vioscreen_hei2010_empty_calories |
Not provided |
| vioscreen_hei2010_fatty_acids |
Not provided |
| vioscreen_hei2010_fruit |
Not provided |
| vioscreen_hei2010_greens_beans |
Not provided |
| vioscreen_hei2010_protien_foods |
Not provided |
| vioscreen_hei2010_refined_grains |
Not provided |
| vioscreen_hei2010_score |
Not provided |
| vioscreen_hei2010_sea_foods_plant_protiens |
Not provided |
| vioscreen_hei2010_sodium |
Not provided |
| vioscreen_hei2010_veg |
Not provided |
| vioscreen_hei2010_whole_fruit |
Not provided |
| vioscreen_hei2010_whole_grains |
Not provided |
| vioscreen_hei_drk_g_org_veg_leg |
Not provided |
| vioscreen_hei_fruit |
Not provided |
| vioscreen_hei_grains |
Not provided |
| vioscreen_hei_meat_beans |
Not provided |
| vioscreen_hei_milk |
Not provided |
| vioscreen_hei_non_juice_frt |
Not provided |
| vioscreen_hei_oils |
Not provided |
| vioscreen_hei_sat_fat |
Not provided |
| vioscreen_hei_score |
Not provided |
| vioscreen_hei_sodium |
Not provided |
| vioscreen_hei_sol_fat_alc_add_sug |
Not provided |
| vioscreen_hei_veg |
Not provided |
| vioscreen_hei_whl_grains |
Not provided |
| vioscreen_height |
Not provided |
| vioscreen_histidin |
Not provided |
| vioscreen_inositol |
Not provided |
| vioscreen_iron |
Not provided |
| vioscreen_isoleuc |
Not provided |
| vioscreen_isomalt |
Not provided |
| vioscreen_joules |
Not provided |
| vioscreen_juice_servings |
Not provided |
| vioscreen_lactitol |
Not provided |
| vioscreen_lactose |
Not provided |
| vioscreen_legumes |
Not provided |
| vioscreen_leucine |
Not provided |
| vioscreen_line_gi |
Not provided |
| vioscreen_low_fat_dairy_serving |
Not provided |
| vioscreen_lutzeax |
Not provided |
| vioscreen_lycopene |
Not provided |
| vioscreen_lysine |
Not provided |
| vioscreen_m_egg |
Not provided |
| vioscreen_m_fish_hi |
Not provided |
| vioscreen_m_fish_lo |
Not provided |
| vioscreen_m_frank |
Not provided |
| vioscreen_m_meat |
Not provided |
| vioscreen_m_mpf |
Not provided |
| vioscreen_m_nutsd |
Not provided |
| vioscreen_m_organ |
Not provided |
| vioscreen_m_poult |
Not provided |
| vioscreen_m_soy |
Not provided |
| vioscreen_magnes |
Not provided |
| vioscreen_maltitol |
Not provided |
| vioscreen_maltose |
Not provided |
| vioscreen_mangan |
Not provided |
| vioscreen_mannitol |
Not provided |
| vioscreen_methhis3 |
Not provided |
| vioscreen_methion |
Not provided |
| vioscreen_mfa141 |
Not provided |
| vioscreen_mfa161 |
Not provided |
| vioscreen_mfa181 |
Not provided |
| vioscreen_mfa201 |
Not provided |
| vioscreen_mfa221 |
Not provided |
| vioscreen_mfatot |
Not provided |
| vioscreen_multi_calcium_avg |
Not provided |
| vioscreen_multi_calcium_dose |
Not provided |
| vioscreen_multivitamin |
Not provided |
| vioscreen_multivitamin_freq |
Not provided |
| vioscreen_natoco |
Not provided |
| vioscreen_nccglbr |
Not provided |
| vioscreen_nccglgr |
Not provided |
| vioscreen_niacin |
Not provided |
| vioscreen_niacineq |
Not provided |
| vioscreen_nitrogen |
Not provided |
| vioscreen_non_fried_fish_servings |
Not provided |
| vioscreen_nutrient_recommendation |
Not provided |
| vioscreen_omega3 |
Not provided |
| vioscreen_oxalic |
Not provided |
| vioscreen_oxalicm |
Not provided |
| vioscreen_pantothe |
Not provided |
| vioscreen_pectins |
Not provided |
| vioscreen_pfa182 |
Not provided |
| vioscreen_pfa183 |
Not provided |
| vioscreen_pfa184 |
Not provided |
| vioscreen_pfa204 |
Not provided |
| vioscreen_pfa205 |
Not provided |
| vioscreen_pfa225 |
Not provided |
| vioscreen_pfa226 |
Not provided |
| vioscreen_pfatot |
Not provided |
| vioscreen_phenylal |
Not provided |
| vioscreen_phosphor |
Not provided |
| vioscreen_phytic |
Not provided |
| vioscreen_pinitol |
Not provided |
| vioscreen_potass |
Not provided |
| vioscreen_procdate |
Not provided |
| vioscreen_proline |
Not provided |
| vioscreen_protanim |
Not provided |
| vioscreen_protein |
Not provided |
| vioscreen_protocol |
Not provided |
| vioscreen_protveg |
Not provided |
| vioscreen_questionnaire |
Not provided |
| vioscreen_recno |
Not provided |
| vioscreen_retinol |
Not provided |
| vioscreen_rgrain |
Not provided |
| vioscreen_ribofla |
Not provided |
| vioscreen_sacchar |
Not provided |
| vioscreen_salad_vegetable_servings |
Not provided |
| vioscreen_satoco |
Not provided |
| vioscreen_scf |
Not provided |
| vioscreen_scfv |
Not provided |
| vioscreen_selenium |
Not provided |
| vioscreen_serine |
Not provided |
| vioscreen_sfa100 |
Not provided |
| vioscreen_sfa120 |
Not provided |
| vioscreen_sfa140 |
Not provided |
| vioscreen_sfa160 |
Not provided |
| vioscreen_sfa170 |
Not provided |
| vioscreen_sfa180 |
Not provided |
| vioscreen_sfa200 |
Not provided |
| vioscreen_sfa220 |
Not provided |
| vioscreen_sfa40 |
Not provided |
| vioscreen_sfa60 |
Not provided |
| vioscreen_sfa80 |
Not provided |
| vioscreen_sfatot |
Not provided |
| vioscreen_sodium |
Not provided |
| vioscreen_sorbitol |
Not provided |
| vioscreen_srvid |
Not provided |
| vioscreen_starch |
Not provided |
| vioscreen_started |
Not provided |
| vioscreen_subject_id |
Not provided |
| vioscreen_sucpoly |
Not provided |
| vioscreen_sucrlose |
Not provided |
| vioscreen_sucrose |
Not provided |
| vioscreen_sweet_servings |
Not provided |
| vioscreen_tagatose |
Not provided |
| vioscreen_tfa161t |
Not provided |
| vioscreen_tfa181t |
Not provided |
| vioscreen_tfa182t |
Not provided |
| vioscreen_tgrain |
Not provided |
| vioscreen_thiamin |
Not provided |
| vioscreen_threonin |
Not provided |
| vioscreen_time |
Not provided |
| vioscreen_totaltfa |
Not provided |
| vioscreen_totcla |
Not provided |
| vioscreen_totfolat |
Not provided |
| vioscreen_totsugar |
Not provided |
| vioscreen_tryptoph |
Not provided |
| vioscreen_tyrosine |
Not provided |
| vioscreen_user_id |
Not provided |
| vioscreen_v_drkgr |
Not provided |
| vioscreen_v_orange |
Not provided |
| vioscreen_v_other |
Not provided |
| vioscreen_v_potato |
Not provided |
| vioscreen_v_starcy |
Not provided |
| vioscreen_v_tomato |
Not provided |
| vioscreen_v_total |
Not provided |
| vioscreen_valine |
Not provided |
| vioscreen_veg5_day |
Not provided |
| vioscreen_vegetable_servings |
Not provided |
| vioscreen_vegsumm |
Not provided |
| vioscreen_visit |
Not provided |
| vioscreen_vita_iu |
Not provided |
| vioscreen_vita_rae |
Not provided |
| vioscreen_vita_re |
Not provided |
| vioscreen_vitb12 |
Not provided |
| vioscreen_vitb6 |
Not provided |
| vioscreen_vitc |
Not provided |
| vioscreen_vitd |
Not provided |
| vioscreen_vitd2 |
Not provided |
| vioscreen_vitd3 |
Not provided |
| vioscreen_vitd_iu |
Not provided |
| vioscreen_vite_iu |
Not provided |
| vioscreen_vitk |
Not provided |
| vioscreen_water |
Not provided |
| vioscreen_weight |
Not provided |
| vioscreen_wgrain |
Not provided |
| vioscreen_whole_grain_servings |
Not provided |
| vioscreen_xylitol |
Not provided |
| vioscreen_zinc |
Not provided |
| vitamin_b_supplement_frequency |
Never |
| vitamin_d_supplement_frequency |
Daily |
| vivid_dreams |
Never |
| weight_change |
Remained stable |
| weight_kg |
64 |
| weight_units |
kilograms |
| whole_eggs |
Regularly (3-5 times/week) |
| whole_grain_frequency |
Regularly (3-5 times/week) |