home > biosample > SAMN00000017
identifier SAMN00000017
type biosample
sameAs
sra-sample  SRS000017
organism 471872
attributes
finishing strategy (depth of coverage)  Level 3: Improved-High-Quality Draft13.9x;29
collection date  not determined
estimated_size  1925000
sop  http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
project_type  Reference Genome
host  Homo sapiens
lat_lon  not determined
biome  terrestrial biome [ENVO:00000446]
misc_param: HMP body site  not determined
nucleic acid extraction  not determined
feature  human-associated habitat [ENVO:00009003]
investigation_type  missing
host taxid  9606
project_name  Streptococcus infantarius infantarius ATCC BAA-102
assembly  Newbler, PCAP
geo_loc_name  not determined
source_mat_id  ATCC BAA-102, LMG 19578, CCUG 43820
material  biological product [ENVO:02000043]
ref_biomaterial  not determined
misc_param: HMP supersite  gastrointestinal_tract
num_replicons  not determined
sequencing method  454-GS20, Sanger
isol_growth_condt  not determined
env_package  missing
strain  ATCC BAA-102
sub_species  infantarius
isolation-source  missing
type-material  type strain of Streptococcus infantarius
properties 
{...}
dbXrefs
bioproject  PRJNA20527
sra-run  SRR000137SRR000138SRR000139SRR000140SRR000141SRR000142
sra-submission  SRA000246
sra-study  SRP000017
sra-sample  SRS000017
sra-experiment  SRX000023
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2011-02-24T14:19:05Z
dateModified 2019-06-20T16:11:22Z
datePublished 2008-04-04T00:00:00Z