home > biosample > SAMN01992986
identifier SAMN01992986
type biosample
sameAs
organism 1005478
attributes
environment (biome)　 terrestrial biome [ENVO:00000446]
sample size (ul)　 missing
NCBI TAXON_ID　 1005478
serotype　 O157:H7
collection date　 1991
isol_growth_condt　 missing
specific host　 cow
lat_lon　 missing
finishing strategy (depth of coverage)　 240
misc feature: metabolism　 missing
nucleic acid extraction　 missing
project name　 Genomic anatomy of E.coli O157:H7 outbreaks: Insights into pathogenome evolution and population dynamics during the time-course of infection.
investigation_type　 bacteria_archaea
host taxid　 9913
environment (feature)　 livestock-associated habitat [ENVO:02000005]
phenotype　 lineage II
subspecific genetic lineage: clade　 missing
assembly　 Velvet 1.1.04
geo_loc_name　 USA:New York
ref_biomaterial　 missing
environment (material)　 feces [ENVO:00002003]
sequencing method　 Illumina
body product　 stool
env_package　 missing
num_replicons　 missing
strain　 FRIK1990
properties　▽ 
{...}
dbXrefs
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biosample_set.xml.gz　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2013-03-27T14:45:27Z
dateModified 2019-06-20T16:19:35Z
datePublished 2013-03-28T00:00:00Z