| attributes |
| env_package |
MIGS/MIMS/MIMARKS.host-associated |
| investigation_type |
metagenome |
| label |
swine |
| biome |
swine intestinal tract |
| collection_date |
2010-01-28 |
| feature |
none |
| geo_loc_name |
USA: Ames, Iowa |
| lat_lon |
42°02?05?N 93°37?12?W |
| material |
contents of the midcolon near the spiral bend |
| project_name |
Swine gut microbial ecology along the gut transect |
| samp_mat_process |
blend 5 g material in PBS, centrifuge at 250xg to reduce plant material, then centrifuge the supernatant at 10,000g to pellet the cells, followed by bead beating the resuspended pellet for bulk DNA extraction (kit by MoBio) |
| specific_host |
Pig 68 |
| host_common_name |
pig |
| host_growth_cond |
ambient |
| host_taxid |
9825 |
| perturbation |
non-medicated |
| samp_size |
up to 5 grams feces/gut contents |
| samp_store_dur |
1 to 6 months |
| samp_store_temp |
-20 degrees Celsius |
| host_age |
108 days old |
| host_body_product |
intestinal contents |
| host_tissue_sampled |
colon |
| host_diet |
TechStart 17-25, Kent Feeds, Muscatine, IA |
| host_family_relationship |
offspring of sow C |
| host_last_meal |
not fasted before euthanasia |
| host_life_stage |
grower pig |
| host_sex |
male |
|