home > biosample > SAMN02463689
identifier SAMN02463689
type biosample
sameAs
sra-sample  SRS4768291
organism 457424
attributes
environment (biome)  terrestrial biome [ENVO:00000446]
collection date  not determined
estimated_size  5486000
strain  3_1_12
project_type  Reference Genome
lat_lon  not determined
finishing strategy (depth of coverage)  Level 2: High-Quality Draft23.24x;104
source_mat_id  BEI HM-20
misc_param: HMP body site  not determined
nucleic acid extraction  not determined
investigation_type  bacteria_archaea
misc_param: HMP supersite  gastrointestinal_tract
host taxid  9606
environment (feature)  human-associated habitat [ENVO:00009003]
isol_growth_condt  not determined
project_name  Bacteroides fragilis 3_1_12
assembly  Newbler v. 2.1-PreRelease-4/28/2009
geo_loc_name  not determined
ref_biomaterial  not determined
host  Homo sapiens
environment (material)  biological product [ENVO:02000043]
sequencing method  454
sop  http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
env_package  missing
num_replicons  not determined
isolation-source  missing
properties 
{...}
dbXrefs
bioproject  PRJNA543187
sra-run  SRR9067179SRR9067271
sra-submission  SRA887312SRA887332
sra-study  SRP198582
sra-sample  SRS4768291
sra-experiment  SRX5843249SRX5843323
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2013-12-18T11:11:26Z
dateModified 2019-05-16T02:06:49Z
datePublished 2013-12-18T11:11:26Z