identifier
DRX037271
type
sra-experiment
sameAs
organism
title
12260-130A1_SRhi10062.CCGTCC
library descriptor
1{
2  "LIBRARY_NAME": "SRhi10062.CCGTCC",
3  "LIBRARY_STRATEGY": "miRNA-Seq",
4  "LIBRARY_SOURCE": "TRANSCRIPTOMIC",
5  "LIBRARY_SELECTION": "unspecified",
6  "LIBRARY_LAYOUT": {}
7}
platform
ILLUMINA
Illumina HiSeq 2000
properties
1{
2  "alias": "DRX037271",
3  "center_name": "RIKEN_OSC",
4  "accession": "DRX037271",
5  "TITLE": "12260-130A1_SRhi10062.CCGTCC",
6  "STUDY_REF": {
7    "refname": "DRP001151",
8    "refcenter": "RIKEN_OSC",
9    "accession": "DRP001151",
10    "IDENTIFIERS": {
11      "PRIMARY_ID": {
12        "label": "BioProject ID",
13        "content": "PRJDB2675"
14      }
15    }
16  },
17  "DESIGN": {
18    "DESIGN_DESCRIPTION": "",
19    "SAMPLE_DESCRIPTOR": {
20      "refname": "DRS008481",
21      "refcenter": "RIKEN_OSC",
22      "accession": "DRS008481",
23      "IDENTIFIERS": {
24        "PRIMARY_ID": {
25          "label": "BioSample ID",
26          "content": "SAMD00004711"
27        }
28      }
29    },
30    "LIBRARY_DESCRIPTOR": {
31      "LIBRARY_NAME": "SRhi10062.CCGTCC",
32      "LIBRARY_STRATEGY": "miRNA-Seq",
33      "LIBRARY_SOURCE": "TRANSCRIPTOMIC",
34      "LIBRARY_SELECTION": "unspecified",
35      "LIBRARY_LAYOUT": {}
36    },
37    "SPOT_DESCRIPTOR": {
38      "SPOT_DECODE_SPEC": {
39        "SPOT_LENGTH": "51",
40        "READ_SPEC": [
41          {
42            "READ_INDEX": "0",
43            "READ_CLASS": "Application Read",
44            "READ_TYPE": "Forward",
45            "BASE_COORD": "1"
46          }
47        ]
48      }
49    }
50  },
51  "PLATFORM": {
52    "ILLUMINA": {
53      "INSTRUMENT_MODEL": "Illumina HiSeq 2000"
54    }
55  },
56  "PROCESSING": {
57    "PIPELINE": {
58      "PIPE_SECTION": [
59        {
60          "STEP_INDEX": "1",
61          "PREV_STEP_INDEX": [
62            "NIL"
63          ],
64          "PROGRAM": "",
65          "VERSION": ""
66        }
67      ]
68    }
69  },
70  "EXPERIMENT_ATTRIBUTES": {
71    "EXPERIMENT_ATTRIBUTE": [
72      {
73        "TAG": "library_protocol",
74        "VALUE": "OP-SOLEXA-shortRNA-TruSeq-v2.0"
75      },
76      {
77        "TAG": "sequence_protocol",
78        "VALUE": "OP-HiSeq2000-sequencing-cBot-v3.0"
79      }
80    ]
81  }
82}
dbXref
bioproject
PRJDB2675
biosample
SAMD00004711
sra-run
DRR041637
sra-sample
DRS008481
sra-study
DRP001151
sra-submission
DRA003804
download
DRA003804.experiment.xml

HTTPSFTP

status
public
visibility
unrestricted-access
dateCreated
2017-08-17T22:02:07+09:00
dateModified
2017-08-17T23:16:27+09:00
datePublished
2017-08-17T23:16:27+09:00
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