home > sra-sample > DRS034186
identifier DRS034186
type sra-sample
sameAs
organism Arabidopsis halleri subsp. gemmifera
attributes
collection_date  2009-01-07
isol_growth_condt  10.1093/nar/gkt1376
description  This individual (W302) is a progeny of a wild type individual (A. halleri subsp. gemmifera (Matsumura) O' Kane and Al-Shehbaz) that was collected from a population located on a contaminated Tada mine site near Tada mine, Inagawa, Hyogo, Japan. To obtain W302, five rounds of self-fertilization by bud pollination were conducted in the lab to reduce heterozygosity.
bioproject_id  PRJDB4382
dev_stage  mature
project_name  Genome assembly and annotation of Arabidopsis halleri, a model for heavy metal hyperaccumulation and evolutionary ecology
isolate  W302
env_material  soil
env_biome  temperate coniferous forest
lat_lon  34.89 N 135.35 E
sample_name  W302
env_feature  disturbed area
haplotype  S-haplogroup A
estimated_size  250 Mb
sample_title  Tada mine genotype
ploidy  diploid
propagation  sexual
elev  140 m
num_replicons  not provided
geo_loc_name  Japan: Hyogo, Inagawa, Tadaginzan
tissue_type  leaf
properties 
{...}
dbXrefs
bioproject  PRJDB4382
sra-run  DRR050027DRR050028DRR050029DRR050030DRR050031DRR050032
sra-submission  DRA004201
biosample  SAMD00043903
sra-study  DRP003278
sra-experiment  DRX045069DRX045070DRX045071DRX045072DRX045073DRX045074
distribution JSONJSON-LD
Download
DRA004201.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2015-11-23T13:42:40+09:00
dateModified 2016-09-28T22:52:09+09:00
datePublished 2016-09-28T22:52:09+09:00