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identifier ERS017423
type sra-sample
sameAs
biosample  SAMEA898399
organism Danio rerio
attributes
Age  6 hours
Alias  E-MTAB-434:ZF_6hpf
Broker name  ArrayExpress
Description  Protocols: Zebrafish embryos or tissues were collected from a Tuefel long fin strain incross and grown at 28 C. Collected samples were snap frozen on dry ice and stored at -70 C Total RNA was extracted using Trizol Reagent (Invitrogen) following the manufacturer's instructions. Pellets were resuspended RNase-free 10 mM Tris pH 7.5 and the RNA was quantified using a NanoDrop ND-1000 Spectrophotometer (Axon Instruments). Total RNA was made into an RNAseq Illumina library following the manufacturer's protocol including a DNase treatment between to 2 rounds of polyA pull down. The libraries have fragment size of 250 to 300 bp.
DevelopmentalStage  embryo
INSDC center alias  SC
INSDC center name  Wellcome Sanger Institute
INSDC first public  2011-03-10T17:55:05Z
INSDC last update  2018-03-08T15:25:14Z
INSDC status  public
SRA accession  ERS017423
Sample Name  ERS017423
Sex  mixed
StrainOrLine  Tupfel long fin
Title  ZF_6hpf
properties 
{...}
dbXrefs
bioproject  PRJEB2333
sra-run  ERR022485
sra-submission  ERA015179
biosample  SAMEA898399
sra-study  ERP000400
sra-experiment  ERX008920
distribution JSONJSON-LD
Download
ERA015179.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2011-03-17T17:04:09Z
dateModified 2019-04-25T23:46:10Z
datePublished 2011-03-17T17:14:36Z