home > sra-sample > ERS017427
identifier ERS017427
type sra-sample
sameAs
biosample  SAMEA898400
organism Danio rerio
attributes
Alias  E-MTAB-434:ZF_2cells
Broker name  ArrayExpress
Description  Protocols: Zebrafish embyos or tissues were collected from a Tuebingen strain incross and grown at 28 C. Collected samples were snap frozen on dry ice and stored at -70 C Total RNA was extracted using Trizol Reagent (Invitrogen) following the manufacturer's instructions. Pellets were resuspended RNase-free 10 mM Tris pH 7.5 and the RNA was quantified using a NanoDrop ND-1000 Spectrophotometer (Axon Instruments). Total RNA was made into an RNAseq Illumina library following the manufacturer's protocol including a DNase treatment between to 2 rounds of polyA pull down. The libraries have fragment size of 250 to 300 bp.
DevelopmentalStage  embryo
INSDC center alias  SC
INSDC center name  Wellcome Sanger Institute
INSDC first public  2011-03-10T17:55:05Z
INSDC last update  2018-03-08T15:25:14Z
INSDC status  public
SRA accession  ERS017427
Sample Name  ERS017427
Sex  mixed
StrainOrLine  Tuebingen
Title  ZF_2cells
properties 
{...}
dbXrefs
bioproject  PRJEB2333
sra-run  ERR022484
sra-submission  ERA015179
biosample  SAMEA898400
sra-study  ERP000400
sra-experiment  ERX008924
distribution JSONJSON-LD
Download
ERA015179.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2011-03-17T17:04:09Z
dateModified 2019-04-25T23:46:11Z
datePublished 2011-03-17T17:14:36Z