| ENA first public |
2016-04-28 |
| ENA last update |
2017-08-06 |
| External Id |
SAMEA3947464 |
| INSDC center alias |
UCSDMI |
| INSDC center name |
University of California San Diego Microbiome Initiative |
| INSDC first public |
2016-04-28T17:02:25Z |
| INSDC last update |
2017-08-06T13:25:39Z |
| INSDC status |
public |
| Submitter Id |
qiita_sid_10317:10317.000012132 |
| acid_reflux |
Not provided |
| acne medication |
false |
| acne_medication_otc |
true |
| add_adhd |
I do not have this condition |
| age cat |
Not provided |
| age years |
39 |
| age_corrected |
Not provided |
| alcohol consumption |
Not provided |
| alcohol_frequency |
Not provided |
| alcohol_types |
Not provided |
| alcohol_types_beercider |
true |
| alcohol_types_red_wine |
true |
| alcohol_types_sour_beers |
false |
| alcohol_types_spiritshard_alcohol |
false |
| alcohol_types_unspecified |
false |
| alcohol_types_white_wine |
false |
| allergic to i have no food allergies that i know of |
true |
| allergic_to |
Not provided |
| allergic_to_other |
false |
| allergic_to_peanuts |
false |
| allergic_to_shellfish |
false |
| allergic_to_tree_nuts |
false |
| allergic_to_unspecified |
false |
| alzheimers |
I do not have this condition |
| anonymized name |
000012132 |
| antibiotic_history |
Year |
| appendix_removed |
false |
| artificial_sweeteners |
Not provided |
| asd |
I do not have this condition |
| autoimmune |
I do not have this condition |
| birth year |
1976 |
| bmi |
18.41 |
| bmi_cat |
Underweight |
| bmi_corrected |
18.41 |
| body habitat |
UBERON:feces |
| body product |
UBERON:feces |
| body site |
UBERON:feces |
| bowel_movement_frequency |
Two |
| bowel_movement_quality |
I tend to have normal formed stool - Type 3 and 4 |
| breastmilk_formula_ensure |
false |
| cancer |
Not provided |
| cancer treatment |
Not provided |
| cardiovascular_disease |
I do not have this condition |
| cat |
true |
| cdiff |
I do not have this condition |
| census_region |
Northeast |
| chickenpox |
Yes |
| clinical condition |
Diagnosed by a medical professional (doctor, physician assistant) |
| collection date |
2013-11-13 |
| collection month |
November |
| collection season |
Fall |
| collection time |
10:30 |
| collection_timestamp |
2013-11-13 10:30 |
| consume_animal_products_abx |
Not sure |
| contraceptive |
No |
| cosmetics_frequency |
Never |
| country |
USA |
| country of birth |
United States |
| country_residence |
Not provided |
| csection |
false |
| deodorant_use |
I use deodorant |
| depression_bipolar_schizophrenia |
Not provided |
| diabetes |
I do not have this condition |
| diabetes type |
Not provided |
| diet type |
Omnivore but do not eat red meat |
| dna_extracted |
true |
| dog |
false |
| dominant hand |
I am right handed |
| drinking_water_source |
City |
| drinks_per_session |
Not provided |
| economic_region |
Mideast |
| elevation |
19.4 |
| env biome |
dense settlement biome |
| env feature |
human-associated habitat |
| env package |
human-gut |
| env_material |
feces |
| epilepsy_or_seizure_disorder |
I do not have this condition |
| exercise_frequency |
Regularly (3-5 times/week) |
| exercise_location |
Both |
| fed_as_infant |
Primarily breast milk |
| fermented_plant_frequency |
Rarely (less than once/week) |
| flossing_frequency |
Regularly (3-5 times/week) |
| flu_vaccine_date |
6 months |
| frozen_dessert_frequency |
Rarely (less than once/week) |
| fruit_frequency |
Occasionally (1-2 times/week) |
| fungal_overgrowth |
I do not have this condition |
| geo loc name |
USA |
| gluten |
No |
| has_physical_specimen |
true |
| height cm |
180 |
| height_units |
centimeters |
| high_fat_red_meat_frequency |
Never |
| homecooked_meals_frequency |
Occasionally (1-2 times/week) |
| host common name |
human |
| host subject id |
ef8c61151921f30e9d68b6f00535b12915eadd1af022d61c5009c08ee0169bcc210e501861f8a7462776023a55b913ac65ada3ad54e4aa287ca680ee88b2162c |
| host taxid |
9606 |
| ibd |
I do not have this condition |
| ibd diagnosis |
Not provided |
| ibd_diagnosis_refined |
Not provided |
| ibs |
I do not have this condition |
| kidney_disease |
I do not have this condition |
| lactose |
false |
| last_move |
I have lived in my current state of residence for more than a year. |
| last_travel |
1 year |
| latitude |
40.6 |
| level_of_education |
Bachelor's degree |
| liver_disease |
I do not have this condition |
| livingwith |
No |
| longitude |
-74 |
| lowgrain_diet_type |
false |
| lung disease |
I do not have this condition |
| meat_eggs_frequency |
Occasionally (1-2 times/week) |
| mental_illness |
Not provided |
| mental_illness_type |
Not provided |
| mental_illness_type_anorexia_nervosa |
Not provided |
| mental_illness_type_bipolar_disorder |
Not provided |
| mental_illness_type_bulimia_nervosa |
Not provided |
| mental_illness_type_depression |
Not provided |
| mental_illness_type_ptsd_posttraumatic_stress_disorder |
Not provided |
| mental_illness_type_schizophrenia |
Not provided |
| mental_illness_type_substance_abuse |
Not provided |
| mental_illness_type_unspecified |
Not provided |
| migraine |
I do not have this condition |
| milk_cheese_frequency |
Occasionally (1-2 times/week) |
| milk_substitute_frequency |
Regularly (3-5 times/week) |
| multivitamin |
false |
| nail_biter |
false |
| non_food_allergies |
Not provided |
| non_food_allergies_beestings |
false |
| non_food_allergies_drug_eg_penicillin |
false |
| non_food_allergies_pet_dander |
false |
| non_food_allergies_poison_ivyoak |
false |
| non_food_allergies_sun |
false |
| non_food_allergies_unspecified |
true |
| olive_oil |
Daily |
| one_liter_of_water_a_day_frequency |
Daily |
| other_supplement_frequency |
true |
| pets_other |
Not provided |
| physical_specimen_location |
UCSDMI |
| physical_specimen_remaining |
true |
| pku |
I do not have this condition |
| pool_frequency |
Never |
| poultry_frequency |
Regularly (3-5 times/week) |
| pregnant |
false |
| prepared_meals_frequency |
Regularly (3-5 times/week) |
| probiotic_frequency |
Never |
| public |
true |
| race |
Caucasian |
| ready_to_eat_meals_frequency |
Never |
| red_meat_frequency |
Rarely (less than once/week) |
| roommates_in_study |
No |
| salted_snacks_frequency |
Rarely (less than once/week) |
| sample name |
qiita_sid_10317:10317.000012132 |
| sample type |
Stool |
| seafood_frequency |
Occasionally (1-2 times/week) |
| seasonal_allergies |
false |
| sex |
male |
| sibo |
I do not have this condition |
| skin_condition |
Diagnosed by a medical professional (doctor, physician assistant) |
| sleep_duration |
7-8 hours |
| smoking_frequency |
Never |
| softener |
false |
| specialized_diet |
Not provided |
| specialized_diet_exclude_dairy |
Not provided |
| specialized_diet_exclude_nightshades |
Not provided |
| specialized_diet_exclude_refined_sugars |
Not provided |
| specialized_diet_fodmap |
Not provided |
| specialized_diet_halaal |
Not provided |
| specialized_diet_i_do_not_eat_a_specialized_diet |
Not provided |
| specialized_diet_kosher |
Not provided |
| specialized_diet_modified_paleo_diet |
Not provided |
| specialized_diet_other_restrictions_not_described_here |
Not provided |
| specialized_diet_paleodiet_or_primal_diet |
Not provided |
| specialized_diet_raw_food_diet |
Not provided |
| specialized_diet_unspecified |
Not provided |
| specialized_diet_westenprice_or_other_lowgrain_low_processed_fo |
Not provided |
| state |
NY |
| subset_age |
true |
| subset_antibiotic_history |
false |
| subset_bmi |
false |
| subset_diabetes |
true |
| subset_healthy |
false |
| subset_ibd |
true |
| sugar_sweetened_drink_frequency |
Never |
| sugary_sweets_frequency |
Occasionally (1-2 times/week) |
| survey_id |
9a4b80ac9e383aee |
| teethbrushing_frequency |
Daily |
| thyroid |
I do not have this condition |
| tonsils_removed |
true |
| types_of_plants |
Not provided |
| vegetable_frequency |
Regularly (3-5 times/week) |
| vioscreen_a_bev |
1.442712402 |
| vioscreen_a_cal |
178.7510916 |
| vioscreen_acesupot |
0 |
| vioscreen_activity_level |
Not provided |
| vioscreen_add_sug |
6.858108812999999 |
| vioscreen_addsugar |
36.58810734 |
| vioscreen_adsugtot |
33.65747806 |
| vioscreen_age |
214 |
| vioscreen_alanine |
4.449260555 |
| vioscreen_alcohol |
22.15876632 |
| vioscreen_alcohol_servings |
1.44271 |
| vioscreen_alphacar |
1302.664127 |
| vioscreen_alphtoce |
14.03115101 |
| vioscreen_alphtoco |
12.75997164 |
| vioscreen_arginine |
5.799369917000001 |
| vioscreen_ash |
22.97984 |
| vioscreen_aspartam |
0 |
| vioscreen_aspartic |
9.364658471 |
| vioscreen_avcarb |
212.5797089 |
| vioscreen_bcodeid |
Not provided |
| vioscreen_betacar |
8002.298629999999 |
| vioscreen_betacryp |
122.81571059999999 |
| vioscreen_betaine |
98.02581336 |
| vioscreen_betatoco |
0.44734246200000005 |
| vioscreen_biochana |
0.017369863 |
| vioscreen_bmi |
Not provided |
| vioscreen_caffeine |
73.1914223 |
| vioscreen_calcium |
true |
| vioscreen_calcium_avg |
Not provided |
| vioscreen_calcium_dose |
250 |
| vioscreen_calcium_freq |
Less than once per week |
| vioscreen_calcium_from_dairy_servings |
1.9909 |
| vioscreen_calcium_servings |
4.2849900000000005 |
| vioscreen_calories |
2176.989212 |
| vioscreen_carbo |
243.6830051 |
| vioscreen_cholest |
124.52190709999999 |
| vioscreen_choline |
328.7709118 |
| vioscreen_clac9t11 |
0.050027403 |
| vioscreen_clat10c12 |
0.011342467 |
| vioscreen_copper |
1.830739813 |
| vioscreen_coumest |
0.092547942 |
| vioscreen_cystine |
1.186712479 |
| vioscreen_d_cheese |
0.611698642 |
| vioscreen_d_milk |
1.004082165 |
| vioscreen_d_tot_soym |
2.261561564 |
| vioscreen_d_total |
1.99090409 |
| vioscreen_d_yogurt |
0.373835608 |
| vioscreen_daidzein |
10.25169962 |
| vioscreen_database |
NDSR - V44 |
| vioscreen_delttoco |
2.6370687409999998 |
| vioscreen_discfat_oil |
41.85043878 |
| vioscreen_discfat_sol |
20.65252167 |
| vioscreen_dob |
1/1/1800 |
| vioscreen_eer |
Not provided |
| vioscreen_email |
Not provided |
| vioscreen_erythr |
0.00139726 |
| vioscreen_f_citmlb |
0.51331507 |
| vioscreen_f_nj_citmlb |
0.509561659 |
| vioscreen_f_nj_other |
0.845753458 |
| vioscreen_f_nj_total |
1.355315075 |
| vioscreen_f_other |
0.845753458 |
| vioscreen_f_total |
1.359068486 |
| vioscreen_fat |
81.22784140000002 |
| vioscreen_fiber |
31.05840111 |
| vioscreen_fibh2o |
8.409478007 |
| vioscreen_fibinso |
22.35296046 |
| vioscreen_finished |
12/21/14 |
| vioscreen_fish_servings |
2.3734599999999997 |
| vioscreen_fol_deqv |
837.2049658 |
| vioscreen_fol_nat |
335.4955693 |
| vioscreen_fol_syn |
295.04702480000003 |
| vioscreen_formontn |
0.002657534 |
| vioscreen_fried_fish_servings |
0 |
| vioscreen_fried_food_servings |
0.02192 |
| vioscreen_frt5_day |
2 |
| vioscreen_frtsumm |
2.7 |
| vioscreen_fructose |
18.36523438 |
| vioscreen_fruit_servings |
2 |
| vioscreen_g_nwhl |
2.2297259609999998 |
| vioscreen_g_total |
4.677013993 |
| vioscreen_g_whl |
2.447178002 |
| vioscreen_galactos |
0.569808207 |
| vioscreen_gammtoco |
10.57164491 |
| vioscreen_gender |
false |
| vioscreen_genistn |
13.63246736 |
| vioscreen_glac |
92.63240582 |
| vioscreen_gltc |
104.3113121 |
| vioscreen_glucose |
18.6848499 |
| vioscreen_glutamic |
19.13348138 |
| vioscreen_glycine |
4.047398063 |
| vioscreen_glycitn |
2.863917688 |
| vioscreen_grams |
2950.320548 |
| vioscreen_hei2010_dairy |
8 |
| vioscreen_hei2010_empty_calories |
20 |
| vioscreen_hei2010_fatty_acids |
10 |
| vioscreen_hei2010_fruit |
3.9 |
| vioscreen_hei2010_greens_beans |
5 |
| vioscreen_hei2010_protien_foods |
5 |
| vioscreen_hei2010_refined_grains |
10 |
| vioscreen_hei2010_score |
86.9 |
| vioscreen_hei2010_sea_foods_plant_protiens |
5 |
| vioscreen_hei2010_sodium |
2.5 |
| vioscreen_hei2010_veg |
5 |
| vioscreen_hei2010_whole_fruit |
5 |
| vioscreen_hei2010_whole_grains |
7.5 |
| vioscreen_hei_drk_g_org_veg_leg |
5 |
| vioscreen_hei_fruit |
3.9 |
| vioscreen_hei_grains |
3.6 |
| vioscreen_hei_meat_beans |
10 |
| vioscreen_hei_milk |
8 |
| vioscreen_hei_non_juice_frt |
5 |
| vioscreen_hei_oils |
10 |
| vioscreen_hei_sat_fat |
9.1 |
| vioscreen_hei_score |
83.9 |
| vioscreen_hei_sodium |
2 |
| vioscreen_hei_sol_fat_alc_add_sug |
18.6 |
| vioscreen_hei_veg |
5 |
| vioscreen_hei_whl_grains |
3.7 |
| vioscreen_height |
Not provided |
| vioscreen_histidin |
2.5976713 |
| vioscreen_inositol |
0.21158902899999998 |
| vioscreen_iron |
25.11325985 |
| vioscreen_isoleuc |
4.343396832 |
| vioscreen_isomalt |
0 |
| vioscreen_joules |
9108.517808 |
| vioscreen_juice_servings |
0.007529999999999999 |
| vioscreen_lactitol |
0 |
| vioscreen_lactose |
18.15106887 |
| vioscreen_legumes |
0.578465752 |
| vioscreen_leucine |
7.585178992 |
| vioscreen_line_gi |
468.9893836 |
| vioscreen_low_fat_dairy_serving |
1.3329600000000001 |
| vioscreen_lutzeax |
4891.510616 |
| vioscreen_lycopene |
5569.977397 |
| vioscreen_lysine |
6.23353422 |
| vioscreen_m_egg |
0.321972614 |
| vioscreen_m_fish_hi |
0.713589018 |
| vioscreen_m_fish_lo |
0.638876719 |
| vioscreen_m_frank |
0.09205479 |
| vioscreen_m_meat |
0.7476438759999999 |
| vioscreen_m_mpf |
3.3347669630000003 |
| vioscreen_m_nutsd |
2.219808166 |
| vioscreen_m_organ |
0 |
| vioscreen_m_poult |
1.142575366 |
| vioscreen_m_soy |
1.835507077 |
| vioscreen_magnes |
482.06515410000003 |
| vioscreen_maltitol |
0 |
| vioscreen_maltose |
2.87509565 |
| vioscreen_mangan |
5.91969847 |
| vioscreen_mannitol |
0.349780838 |
| vioscreen_methhis3 |
12.20684932 |
| vioscreen_methion |
1.992438497 |
| vioscreen_mfa141 |
0.065726032 |
| vioscreen_mfa161 |
0.909205356 |
| vioscreen_mfa181 |
31.75098191 |
| vioscreen_mfa201 |
0.501315057 |
| vioscreen_mfa221 |
0.10375341099999999 |
| vioscreen_mfatot |
33.65665935 |
| vioscreen_multi_calcium_avg |
171 |
| vioscreen_multi_calcium_dose |
200 |
| vioscreen_multivitamin |
true |
| vioscreen_multivitamin_freq |
6 |
| vioscreen_natoco |
12.75314908 |
| vioscreen_nccglbr |
162.6883134 |
| vioscreen_nccglgr |
113.8105736 |
| vioscreen_niacin |
27.49526434 |
| vioscreen_niacineq |
46.0747485 |
| vioscreen_nitrogen |
15.93671607 |
| vioscreen_non_fried_fish_servings |
2.3734599999999997 |
| vioscreen_nutrient_recommendation |
Default |
| vioscreen_omega3 |
2.196931855 |
| vioscreen_oxalic |
383.3287671 |
| vioscreen_oxalicm |
373.9322774 |
| vioscreen_pantothe |
5.4216435679999995 |
| vioscreen_pectins |
4.343233291000001 |
| vioscreen_pfa182 |
18.35586473 |
| vioscreen_pfa183 |
1.8354799869999998 |
| vioscreen_pfa184 |
0.024931505 |
| vioscreen_pfa204 |
0.083232874 |
| vioscreen_pfa205 |
0.09660274599999999 |
| vioscreen_pfa225 |
0.045369862000000004 |
| vioscreen_pfa226 |
0.19454793 |
| vioscreen_pfatot |
20.79304366 |
| vioscreen_phenylal |
4.571096426 |
| vioscreen_phosphor |
1724.378082 |
| vioscreen_phytic |
1226.363699 |
| vioscreen_pinitol |
0.052986307 |
| vioscreen_potass |
3973.346575 |
| vioscreen_procdate |
10/28/15 |
| vioscreen_proline |
6.22504147 |
| vioscreen_protanim |
46.62840325 |
| vioscreen_protein |
97.27829623 |
| vioscreen_protocol |
Knight Lab, University of Colorado Boulder |
| vioscreen_protveg |
50.644777399999995 |
| vioscreen_questionnaire |
Egg White Standard Questionnaire (V3) |
| vioscreen_recno |
676 |
| vioscreen_retinol |
477.12277400000005 |
| vioscreen_rgrain |
3.5138083260000004 |
| vioscreen_ribofla |
2.391151073 |
| vioscreen_sacchar |
0 |
| vioscreen_salad_vegetable_servings |
2.2374 |
| vioscreen_satoco |
0.014931506 |
| vioscreen_selenium |
119.5186644 |
| vioscreen_serine |
4.880520588 |
| vioscreen_sfa100 |
0.297287656 |
| vioscreen_sfa120 |
0.5789589239999999 |
| vioscreen_sfa140 |
1.530547845 |
| vioscreen_sfa160 |
11.61049203 |
| vioscreen_sfa170 |
0.091424665 |
| vioscreen_sfa180 |
4.333562313 |
| vioscreen_sfa200 |
0.287479453 |
| vioscreen_sfa220 |
0.405863054 |
| vioscreen_sfa40 |
0.331068483 |
| vioscreen_sfa60 |
0.155616447 |
| vioscreen_sfa80 |
0.155808216 |
| vioscreen_sfatot |
20.30581122 |
| vioscreen_sodium |
3868.4229450000003 |
| vioscreen_sorbitol |
1.067232733 |
| vioscreen_srvid |
16513 |
| vioscreen_starch |
94.60585402 |
| vioscreen_started |
12/21/14 |
| vioscreen_subject_id |
Not provided |
| vioscreen_sucpoly |
0 |
| vioscreen_sucrlose |
0 |
| vioscreen_sucrose |
34.47556453 |
| vioscreen_sweet_servings |
0.20756999999999998 |
| vioscreen_tagatose |
3.566657748 |
| vioscreen_tfa161t |
0.039178085 |
| vioscreen_tfa181t |
0.95273981 |
| vioscreen_tfa182t |
0.29471237 |
| vioscreen_tgrain |
6.2331777079999995 |
| vioscreen_thiamin |
2.109643889 |
| vioscreen_threonin |
3.65989104 |
| vioscreen_time |
27 |
| vioscreen_totaltfa |
1.304054825 |
| vioscreen_totcla |
0.062328772000000005 |
| vioscreen_totfolat |
630.5422089 |
| vioscreen_totsugar |
94.57938784 |
| vioscreen_tryptoph |
1.1144386609999999 |
| vioscreen_tyrosine |
3.4375615369999997 |
| vioscreen_user_id |
16513 |
| vioscreen_v_drkgr |
0.5084383610000001 |
| vioscreen_v_orange |
0.349479466 |
| vioscreen_v_other |
0.9652053620000001 |
| vioscreen_v_potato |
0.137616448 |
| vioscreen_v_starcy |
0.073835619 |
| vioscreen_v_tomato |
0.488657536 |
| vioscreen_v_total |
2.523260247 |
| vioscreen_valine |
5.040438048 |
| vioscreen_veg5_day |
3.7 |
| vioscreen_vegetable_servings |
1 |
| vioscreen_vegsumm |
5 |
| vioscreen_visit |
1 |
| vioscreen_vita_iu |
16116.226030000002 |
| vioscreen_vita_rae |
1203.376199 |
| vioscreen_vita_re |
1929.629966 |
| vioscreen_vitb12 |
7.113040454 |
| vioscreen_vitb6 |
2.690219325 |
| vioscreen_vitc |
119.9581122 |
| vioscreen_vitd |
9.273616759 |
| vioscreen_vitd2 |
0.698794514 |
| vioscreen_vitd3 |
8.574822078 |
| vioscreen_vitd_iu |
370.9446704 |
| vioscreen_vite_iu |
19.025644800000002 |
| vioscreen_vitk |
255.0894264 |
| vioscreen_water |
2500.074144 |
| vioscreen_weight |
Not provided |
| vioscreen_wgrain |
2.719342459 |
| vioscreen_whole_grain_servings |
2.44718 |
| vioscreen_xylitol |
0.066082189 |
| vioscreen_zinc |
17.08659969 |
| vitamin_b_supplement_frequency |
Daily |
| vitamin_d_supplement_frequency |
Daily |
| vivid_dreams |
Not provided |
| weight kg |
59 |
| weight_change |
Remained stable |
| weight_units |
kilograms |
| whole_eggs |
Rarely (less than once/week) |
| whole_grain_frequency |
Regularly (3-5 times/week) |