| ENA first public |
2016-07-08 |
| ENA last update |
2016-07-07 |
| External Id |
SAMEA4067278 |
| INSDC center alias |
UCSDMI |
| INSDC center name |
University of California San Diego Microbiome Initiative |
| INSDC first public |
2016-07-08T17:01:15Z |
| INSDC last update |
2016-07-07T18:55:44Z |
| INSDC status |
public |
| Submitter Id |
qiita_sid_10145:10145.3rd.3A |
| altitude |
0 |
| anonymized name |
3rd-3A |
| approx_distance_from_seawater_at_low_tide |
50 |
| approx_distance_transect_start_to_highest_tide_line_meters |
45 |
| area |
Calvert Island |
| assigned_from_geo |
true |
| bearing_degrees |
332 |
| chlorophyll |
0.019 |
| chlorophyll_method |
90 percent acetone extraction |
| chlorophyll_units |
ug/g sand or ug/L |
| collection_timestamp |
Missing: Not provided |
| common name |
ground water metagenome |
| country |
Canada |
| degree_of_saturation_percent |
89.1 |
| depth |
0-.001 |
| dna_ext_method |
collect microbes onto 0.22 um filter, extract with MoBio PowerSoil kit |
| dna_extracted |
true |
| elevation |
2.5 |
| env biome |
marine benthic biome |
| env feature |
high tide zone |
| env matter |
ground water |
| env package |
water |
| extracted DNA avail now |
true |
| g_sand_or_ml_sw_for_dna_extraction |
1.8 |
| has_extracted_data |
true |
| has_physical_specimen |
true |
| host common name |
ground water metagenome |
| host subject id |
3rd-3A |
| host taxid |
717931 |
| latitude |
51.65 |
| longitude |
-128.15 |
| moisture content |
0.22 |
| moisture_content_meth |
dry at 110degC |
| moisture_content_units |
gH2O/gsand |
| nh4_n |
0.3 |
| nh4_n_meth |
2N KCl Extractable |
| nh4_n_units |
mg/kg |
| no3_n |
0.17 |
| no3_n_meth |
2N KCl Extractable |
| no3_n_units |
mg/kg |
| organic_matter_meth |
LOI at 450 degC |
| organic_matter_percent |
0.4 |
| physical_specimen_location |
UBC |
| physical_specimen_remaining |
true |
| po4_p |
1.3 |
| po4_p_meth |
Bray P-1 |
| po4_p_units |
mg per kg |
| public |
true |
| required_sample_info_status |
complete |
| sample name |
qiita_sid_10145:10145.3rd.3A |
| sample type |
ground water |
| sand_grain_method |
shake sand through sieves |
| sand_grains_between_106_and_45um_percent |
0.14 |
| sand_grains_between_250_and_106um_percent |
27.16 |
| sand_grains_between_355_and_250um_percent |
47.41 |
| sand_grains_greater_than_355um_percent |
25.29 |
| sand_grains_less_than_45um_percent |
0 |
| seawater_or_pore_water_ph |
8.3 |
| seawater_or_pore_water_ph_meth |
pH meter |
| seawater_or_pore_water_salinity |
31 |
| seawater_or_pore_water_salinity_meth |
refractrometer |
| sediment_ph |
8.86 |
| sediment_ph_meth |
20g dry sand + 20ml dH2O, shake, let sit ~30mins; pH meter |
| sediment_salinity |
8.14 |
| sediment_salinity_meth |
20g dry sand + 20ml dH2O, shake, let sit ~30mins; conductivity meter |
| sediment_salinity_units |
ppt |
| slope aspect |
North west |
| temp |
13.5 |
| weather |
Overcast to partly cloudy |