home > sra-sample > ERS1238490
identifier ERS1238490
type sra-sample
sameAs
biosample  SAMEA4067380
organism hydrothermal vent metagenome
attributes
ENA first public  2016-07-08
ENA last update  2016-07-07
External Id  SAMEA4067380
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-08T17:01:15Z
INSDC last update  2016-07-07T21:00:49Z
INSDC status  public
Submitter Id  qiita_sid_804:804.3864.1537E
age_of_minerals_years  17.46233205
alkalinity  Missing: Not provided
altitude  0
anonymized name  3864.1537E
assigned_from_geo  true
barium  19.61
bromide  Missing: Not provided
calcium  0.1424
carb_nitro_ratio  Missing: Not provided
chloride  Missing: Not provided
chromium  BDL
cobalt  BDL
collection_timestamp  04/29/2003
common name  hydrothermal vent metagenome
copper  BDL
country  GAZ:North Atlantic Ocean
depth  764
diss_carb_dioxide  Missing: Not provided
dna_extracted  true
elevation  0
env biome  marine benthic biome
env feature  hydrothermal vent
env matter  biofilm
env package  microbial mat/biofilm
extracted DNA avail now  true
geo loc name  North Atlantic Ocean:Lost City hydrothermal field
host subject id  3864.1537E
latitude  30.123979
longitude  -42.119885
magnesium  0.184
manganese  BDL
methane  Missing: Not provided
molybdenum  0.38
nickel  BDL
org_carb  Missing: Not provided
organism count  1500000000
ph  Missing: Not provided
ph_meth  Missing: Not provided
phosphate  Missing: Not provided
phosplipid_fatt_acid  Missing: Not provided
physical_specimen_location  Brazelton lab, East Carolina University
physical_specimen_remaining  true
porosity  Missing: Not provided
potassium  7.0E-4
public  true
redox potential  Missing: Not provided
required_sample_info_status  completed
salinity  Missing: Not provided
samp_store_temp  -80
sample description  very friable, bright white, quill-shaped flow channels (IMAX flange edge (left))
sample name  qiita_sid_804:804.3864.1537E
sample type  biofilm
sample_progress  sequenced (16S)
strontium  4977.53
sulfate  Missing: Not provided
sulfide  Missing: Not provided
temp  53.5
titanium  BDL
total_inorg_carb  Missing: Not provided
uranium  2.96
vanadium  0.76
water content  0.0163
properties 
{...}
dbXrefs
bioproject  PRJEB14729
sra-run  ERR1520158
sra-submission  ERA673823
biosample  SAMEA4067380
sra-study  ERP016395
sra-experiment  ERX1591126
distribution JSONJSON-LD
Download
ERA673823.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-12T11:40:28Z
dateModified 2021-09-24T09:41:06Z
datePublished 2016-07-12T12:18:36Z