home > sra-sample > ERS1247146
identifier ERS1247146
type sra-sample
sameAs
biosample　 SAMEA4076036
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076036
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:14:56Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E1A01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned　 No
altitude　 0
anonymized name　 E1A01
arcsine_fledge_success_brood　 0.100167421
arcsine_fledge_success_clutch　 0.089562407
arcsine_hatching_success　 Missing: Not collected
area　 Calahorra
assigned_from_geo　 true
backup　 false
bird_family　 Corvidae
bird_order　 Passeriformes
broken_eggs　 0
brood_size　 4
clutch_size　 5
code_id_statistica　 168
coll_date_juliane_days　 89
collection date　 3/31/07
collection_timestamp　 3/31/07
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 3/31/07
depth　 0
dna_extracted　 true
elevation　 1106
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 2.217024173
enterococcus_density　 1
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 CHO 1.1
estefania_plates　 1A01
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 1
fledge_success_clutch　 0.8
fledging_date　 5/10/07
geo loc name　 Spain:Hoya de Guadix
hatching_date　 4/9/07
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Red-billed chough
host scientific name　 Passeriformes
host subject id　 Chova.Cho1.2
host taxid　 56790
latitude　 37.25371111
lay_date_juliane_days　 75
laying_date　 6/15/07
log_enterobacteriaceae_density　 0.507454324
log_enterococcus_density　 0.301029996
log_mesophiles_density　 1.065446239
log_rel_growth_enterobact　 Missing: Not provided
log_rel_growth_enterococcus　 Missing: Not provided
log_rel_growth_mesophiles　 Missing: Not provided
log_rel_growth_staphylococcus　 Missing: Not provided
log_staphylococcus_density　 0.031993503
longitude　 -3.029825
mesophiles_density　 10.62642621
nest_type　 hole
number_fledging　 4
number_sampled_eggs　 5
observer　 Juanma
physical_location_1　 U Granada
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
platero_plates　 P1A01
predated　 No
public　 true
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E1A01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Chova.Cho1.2
sample_progress　 sequenced (16S)
sampling time　 2
sampling_code_id　 1
species name　 Pyrrhocorax phyrrhocorax
staphylococcus_density　 0.076449109
storing_days　 0
unhatched_eggs　 1
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1529710
sra-submission　 ERA674159
biosample　 SAMEA4076036
sra-study　 ERP016455
sra-experiment　 ERX1600602
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:48:13Z
dateModified 2021-09-24T10:00:12Z
datePublished 2016-07-14T16:21:15Z