ENA first public |
2016-07-13 |
ENA last update |
2016-07-13 |
External Id |
SAMEA4076104 |
INSDC center alias |
UCSDMI |
INSDC center name |
University of California San Diego Microbiome Initiative |
INSDC first public |
2016-07-13T17:01:27Z |
INSDC last update |
2016-07-13T01:14:58Z |
INSDC status |
public |
Submitter Id |
qiita_sid_1632:1632.E1F08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences |
abandoned |
No |
altitude |
0 |
anonymized name |
E1F08 |
arcsine_fledge_success_brood |
0 |
arcsine_fledge_success_clutch |
0 |
arcsine_hatching_success |
Missing: Not collected |
area |
Sierra Maria |
assigned_from_geo |
true |
backup |
false |
bird_family |
Corvidae |
bird_order |
Passeriformes |
broken_eggs |
1 |
brood_size |
3 |
clutch_size |
4 |
code_id_statistica |
203 |
coll_date_juliane_days |
114 |
collection date |
4/17/07 0:00 |
collection_timestamp |
4/17/07 |
comments_in_spanish |
Desparece un huevo durante la incubacion. Depredado con pollos |
common name |
organismal metagenome |
country |
GAZ:Spain |
country_nation |
Spain |
country_region |
Hoya de Guadix |
culturing_date |
4/19/07 |
depth |
0 |
dna_extracted |
true |
elevation |
1199 |
empo_0 |
EMP sample |
empo_1 |
Host-associated |
empo_2 |
Animal |
empo_3 |
Animal surface |
enterobacteriaceae_density |
47.04764587 |
enterococcus_density |
0.108906588 |
env biome |
mediterranean shrubland biome |
env feature |
nest of bird |
env matter |
egg |
env package |
host-associated |
eppendorf_name |
CORDAV.1 |
estefania_plates |
1F08 |
extracted DNA avail now |
true |
feathers |
true |
fledge_success_brood |
0 |
fledge_success_clutch |
0 |
fledging_date |
Missing: Not collected |
geo loc name |
Spain:Hoya de Guadix |
hatching_date |
5/4/07 |
hatching_success |
Missing: Not collected |
hatching_synchrony |
asyn |
host common name |
Carrion crow |
host scientific name |
Passeriformes |
host subject id |
Corneja.CorDav.1 |
host taxid |
181097 |
latitude |
37.71095556 |
lay_date_juliane_days |
100 |
laying_date |
7/10/07 |
log_enterobacteriaceae_density |
1.681672114 |
log_enterococcus_density |
0.044894963 |
log_mesophiles_density |
0 |
log_rel_growth_enterobact |
6.212524592 |
log_rel_growth_enterococcus |
0.256135032 |
log_rel_growth_mesophiles |
8.228183004 |
log_rel_growth_staphylococcus |
-0.044894963 |
log_staphylococcus_density |
0.044894963 |
longitude |
-2.164844444 |
mesophiles_density |
0 |
nest_type |
open |
number_fledging |
0 |
number_sampled_eggs |
4 |
observer |
David |
physical_location_1 |
U Granada |
physical_specimen_location |
CCME |
physical_specimen_remaining |
true |
plants |
true |
predated |
brood phase |
public |
true |
rel_growth_enterobacteriaceae |
1631264.278 |
rel_growth_enterococcus |
0.803578428 |
rel_growth_staphylococcus |
-0.098210786 |
relative_growth_mesophiles |
1.691153394E8 |
required_sample_info_status |
completed |
sample name |
qiita_sid_1632:1632.E1F08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences |
sample type |
bird egg shell |
sample_nest |
Corneja.CorDav.1 |
sample_progress |
sequenced (16S) |
sampling time |
1 |
sampling_code_id |
69 |
species name |
Corvus corone |
staphylococcus_density |
0.108906588 |
storing_days |
2 |
unhatched_eggs |
0 |
year |
2007 |