home > sra-sample > ERS1247248
identifier ERS1247248
type sra-sample
sameAs
biosample　 SAMEA4076138
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076138
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:14:59Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E2A04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude　 0
anonymized name　 E2A04
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 1.18319964
area　 Calahorra
assigned_from_geo　 true
backup　 false
bird_family　 Sturnidae
bird_order　 Passeriformes
broken_eggs　 0
brood_size　 6
clutch_size　 7
code_id_statistica　 283
coll_date_juliane_days　 112
collection date　 4/23/07 0:00
collection_timestamp　 4/23/07
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/1/07
depth　 0
dna_extracted　 true
elevation　 1106
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 2.593911074E7
enterococcus_density　 77.99025962
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 E68
estefania_plates　 2A04
extracted DNA avail now　 true
feathers　 true
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 5/6/07
hatching_success　 0.857142857
hatching_synchrony　 syn
host common name　 Sptoless starling
host scientific name　 Passeriformes
host subject id　 Estornino.E68.1
host taxid　 381112
latitude　 37.25371111
lay_date_juliane_days　 106
laying_date　 7/16/07
log_enterobacteriaceae_density　 7.4139551
log_enterococcus_density　 1.897573541
log_mesophiles_density　 8.182346499
log_rel_growth_enterobact　 -6.242691193
log_rel_growth_enterococcus　 -1.394918326
log_rel_growth_mesophiles　 -2.719171898
log_rel_growth_staphylococcus　 -1.36585086
log_staphylococcus_density　 1.941827858
longitude　 -3.029825
mesophiles_density　 1.521761163E8
nest_type　 hole
number_fledging　 Missing: Not provided
number_sampled_eggs　 7
observer　 Carlos
physical_location_1　 U Granada
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
platero_plates　 P2A06
public　 true
rel_growth_enterobacteriaceae　 -0.999999428
rel_growth_enterococcus　 -0.959720722
rel_growth_staphylococcus　 -0.956932552
relative_growth_mesophiles　 -0.998090903
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E2A04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Estornino.E68.1
sample_progress　 sequenced (16S)
sampling time　 1
sampling_code_id　 114
species name　 Sturnus unicolor
staphylococcus_density　 86.46370246
storing_days　 8
unhatched_eggs　 1
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1529812
sra-submission　 ERA674159
biosample　 SAMEA4076138
sra-study　 ERP016455
sra-experiment　 ERX1600704
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:48:35Z
dateModified 2021-09-24T10:04:02Z
datePublished 2016-07-14T16:22:14Z