home > sra-sample > ERS1247278
identifier ERS1247278
type sra-sample
sameAs
biosample　 SAMEA4076168
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076168
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:00Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E2C08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude　 0
anonymized name　 E2C08
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Garcia Lorca
assigned_from_geo　 true
backup　 false
bird_family　 Fringillidae
bird_order　 Passeriformes
broken_eggs　 Missing: Not collected
brood_size　 Missing: Not collected
clutch_size　 4
code_id_statistica　 580
coll_date_juliane_days　 116
collection date　 4/27/07 0:00
collection_timestamp　 4/27/07
comments_in_spanish　 Sin datos de los pollos
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/1/07
depth　 0
dna_extracted　 true
elevation　 675
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 2.881019221E7
enterococcus_density　 43.72975604
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 VC21.1
estefania_plates　 2C08
extracted DNA avail now　 true
feathers　 true
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 Missing: Not collected
hatching_success　 Missing: Not collected
hatching_synchrony　 syn
host common name　 European serin
host scientific name　 Passeriformes
host subject id　 Verdecillo.VC21.1
host taxid　 37602
latitude　 37.17907778
lay_date_juliane_days　 Missing: Not provided
laying_date　 Missing: Not provided
log_enterobacteriaceae_density　 7.459546171
log_enterococcus_density　 1.650596529
log_mesophiles_density　 7.693629371
log_rel_growth_enterobact　 Missing: Not provided
log_rel_growth_enterococcus　 Missing: Not provided
log_rel_growth_mesophiles　 Missing: Not provided
log_rel_growth_staphylococcus　 Missing: Not provided
log_staphylococcus_density　 0.307268227
longitude　 -3.611505556
mesophiles_density　 4.938890094E7
nest_type　 open
number_fledging　 Missing: Not provided
number_sampled_eggs　 4
observer　 Juanma
physical_location_1　 U Granada
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
platero_plates　 P2E2
public　 true
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E2C08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Verdecillo.VC21.1
sample_progress　 sequenced (16S)
sampling time　 1
sampling_code_id　 154
species name　 Serinus serinus
staphylococcus_density　 1.028935436
storing_days　 4
unhatched_eggs　 Missing: Not provided
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1529842
sra-submission　 ERA674159
biosample　 SAMEA4076168
sra-study　 ERP016455
sra-experiment　 ERX1600734
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:48:41Z
dateModified 2021-09-24T10:04:10Z
datePublished 2016-07-14T16:22:14Z