home > sra-sample > ERS1247281
identifier ERS1247281
type sra-sample
sameAs
biosample　 SAMEA4076171
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076171
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:00Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E2C11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude　 0
anonymized name　 E2C11
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 1.570796327
area　 Cortijo Perro
assigned_from_geo　 true
backup　 false
bird_family　 Columbiadae
bird_order　 Columbiformes
broken_eggs　 0
brood_size　 2
clutch_size　 2
code_id_statistica　 443
coll_date_juliane_days　 121
collection date　 5/2/07 0:00
collection_timestamp　 5/2/07
comments_in_spanish　 Sin datos de los pollos
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/4/07
depth　 0
dna_extracted　 true
elevation　 1160
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 6340526.486
enterococcus_density　 5647.031402
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 PAL PER 12
estefania_plates　 2C11
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 5/24/07
hatching_success　 1
hatching_synchrony　 asyn
host common name　 Rock pigeon
host scientific name　 Columbiformes
host subject id　 Palomabravia.PalPer12.1
host taxid　 8932
latitude　 37.32654722
lay_date_juliane_days　 119
laying_date　 7/29/07
log_enterobacteriaceae_density　 6.80212539
log_enterococcus_density　 3.751897103
log_mesophiles_density　 7.135824465
log_rel_growth_enterobact　 Missing: Not provided
log_rel_growth_enterococcus　 Missing: Not provided
log_rel_growth_mesophiles　 Missing: Not provided
log_rel_growth_staphylococcus　 Missing: Not provided
log_staphylococcus_density　 2.576881015
longitude　 -3.059219444
mesophiles_density　 1.367176024E7
nest_type　 hole
number_fledging　 Missing: Not provided
number_sampled_eggs　 2
observer　 Juanma
physical_location_1　 U Granada
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 false
platero_plates　 P2F01
public　 true
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E2C11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Palomabravia.PalPer12.1
sample_progress　 sequenced (16S)
sampling time　 1
sampling_code_id　 171
species name　 Columba livia
staphylococcus_density　 376.4687601
storing_days　 2
unhatched_eggs　 0
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1529845
sra-submission　 ERA674159
biosample　 SAMEA4076171
sra-study　 ERP016455
sra-experiment　 ERX1600737
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:48:42Z
dateModified 2021-09-24T10:04:11Z
datePublished 2016-07-14T16:22:14Z