home > sra-sample > ERS1247294
identifier ERS1247294
type sra-sample
sameAs
biosample　 SAMEA4076184
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076184
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:26Z
INSDC last update　 2016-07-13T01:15:01Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E2D10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned　 No
altitude　 0
anonymized name　 E2D10
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Cortijo Conejo
assigned_from_geo　 true
backup　 false
bird_family　 Cuculidae
bird_order　 Cuculiformes
broken_eggs　 0
brood_size　 0
clutch_size　 1
code_id_statistica　 244
coll_date_juliane_days　 120
collection date　 5/1/07 0:00
collection_timestamp　 5/1/07
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/15/07
depth　 0
dna_extracted　 true
elevation　 1055
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 164087.1367
enterococcus_density　 3282.742733
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 UCON 11.4
estefania_plates　 2D10
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 Missing: Not collected
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Great-spotted cuckoo
host scientific name　 Cuculiformes
host subject id　 Crialo.UCON11.2
host taxid　 78203
latitude　 37.40583611
lay_date_juliane_days　 104
laying_date　 7/14/07
log_enterobacteriaceae_density　 5.215077183
log_enterococcus_density　 3.516369125
log_mesophiles_density　 7.52989283
log_rel_growth_enterobact　 -3.156018631
log_rel_growth_enterococcus　 1.784527959
log_rel_growth_mesophiles　 -1.189455209
log_rel_growth_staphylococcus　 0.760710417
log_staphylococcus_density　 0.760710417
longitude　 -3.082122222
mesophiles_density　 3.387605402E7
nest_type　 open
number_fledging　 Missing: Not provided
number_sampled_eggs　 1
observer　 Juanma
physical_location_1　 U Granada
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
platero_plates　 P2E6
predated　 No
public　 true
rel_growth_enterobacteriaceae　 -0.999301798
rel_growth_enterococcus　 59.88747422
rel_growth_staphylococcus　 4.763820096
relative_growth_mesophiles　 -0.935353534
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E2D10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Crialo.UCON11.2
sample_progress　 sequenced (16S)
sampling time　 2
sampling_code_id　 166
species name　 Clamator glandarius
staphylococcus_density　 4.763820096
storing_days　 14
unhatched_eggs　 1
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1529858
sra-submission　 ERA674159
biosample　 SAMEA4076184
sra-study　 ERP016455
sra-experiment　 ERX1600750
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:48:44Z
dateModified 2021-09-24T10:04:14Z
datePublished 2016-07-14T16:22:14Z