home > sra-sample > ERS1247306
identifier ERS1247306
type sra-sample
sameAs
biosample　 SAMEA4076196
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076196
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:01Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E2E08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned　 brood phase
altitude　 0
anonymized name　 E2E08
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Zona Miki
assigned_from_geo　 true
backup　 false
bird_family　 Upuidae
bird_order　 Upupiformes
broken_eggs　 0
brood_size　 4
clutch_size　 9
code_id_statistica　 36
coll_date_juliane_days　 117
collection date　 4/28/07 0:00
collection_timestamp　 4/28/07
comments_in_spanish　 Abandonados
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/1/07
depth　 0
dna_extracted　 true
elevation　 923
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 6976128.687
enterococcus_density　 1
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 790.1
estefania_plates　 2.0E8
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 5/5/07
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Eurasian hoopoe
host scientific name　 Upupiformes
host subject id　 Abubilla.790.2
host taxid　 57439
latitude　 37.32240556
lay_date_juliane_days　 98
laying_date　 7/8/07
log_enterobacteriaceae_density　 6.843614546
log_enterococcus_density　 0.301029996
log_mesophiles_density　 7.086652568
log_rel_growth_enterobact　 Missing: Not provided
log_rel_growth_enterococcus　 Missing: Not provided
log_rel_growth_mesophiles　 Missing: Not provided
log_rel_growth_staphylococcus　 Missing: Not provided
log_staphylococcus_density　 0
longitude　 -3.128919444
mesophiles_density　 1.22082252E7
nest_type　 hole
number_fledging　 Missing: Not provided
number_sampled_eggs　 9
observer　 Manolo
physical_location_1　 U Granada
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 false
platero_plates　 P2D04
predated　 No
public　 true
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E2E08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Abubilla.790.2
sample_progress　 sequenced (16S)
sampling time　 2
sampling_code_id　 149
species name　 Upupa epops
staphylococcus_density　 0
storing_days　 3
unhatched_eggs　 5
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1529870
sra-submission　 ERA674159
biosample　 SAMEA4076196
sra-study　 ERP016455
sra-experiment　 ERX1600762
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:48:46Z
dateModified 2021-09-24T10:04:17Z
datePublished 2016-07-14T16:22:14Z