home > sra-sample > ERS1247315
identifier ERS1247315
type sra-sample
sameAs
biosample　 SAMEA4076205
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076205
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:01Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E2F04.r.EMPbird.v4.NoIndex.L001
abandoned　 No
altitude　 0
anonymized name　 E2F04
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Ogijares
assigned_from_geo　 true
backup　 false
bird_family　 Turdidae
bird_order　 Passeriformes
broken_eggs　 Missing: Not collected
brood_size　 Missing: Not collected
clutch_size　 8
code_id_statistica　 412
coll_date_juliane_days　 111
collection date　 4/22/07 0:00
collection_timestamp　 4/22/07
comments_in_spanish　 Ddepredado
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/1/07
depth　 0
dna_extracted　 true
elevation　 701
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 3.503274476E7
enterococcus_density　 8627.466993
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 MIRLO JUAN
estefania_plates　 2F04
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 Missing: Not collected
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Blackbird
host scientific name　 Passeriformes
host subject id　 Mirlo.MirloJuan.1
host taxid　 9187
latitude　 37.12272222
lay_date_juliane_days　 122
laying_date　 8/1/07
log_enterobacteriaceae_density　 7.544474177
log_enterococcus_density　 3.935933642
log_mesophiles_density　 7.346788312
log_rel_growth_enterobact　 -2.979046746
log_rel_growth_enterococcus　 -3.633427811
log_rel_growth_mesophiles　 -0.461457297
log_rel_growth_staphylococcus　 -0.654990589
log_staphylococcus_density　 1.437834208
longitude　 -3.618477778
mesophiles_density　 2.222226347E7
nest_type　 open
number_fledging　 Missing: Not provided
number_sampled_eggs　 8
observer　 Juan
physical_location_1　 U Granada
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
predated　 egg phase
public　 true
rel_growth_enterobacteriaceae　 -0.998950571
rel_growth_enterococcus　 -0.99976742
rel_growth_staphylococcus　 -0.778685733
relative_growth_mesophiles　 -0.654424693
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E2F04.r.EMPbird.v4.NoIndex.L001
sample type　 bird egg shell
sample_nest　 Mirlo.MirloJuan.1
sample_progress　 sequenced (16S)
sampling time　 1
sampling_code_id　 112
species name　 Turdus merula
staphylococcus_density　 26.40527777
storing_days　 9
unhatched_eggs　 Missing: Not provided
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1529879
sra-submission　 ERA674159
biosample　 SAMEA4076205
sra-study　 ERP016455
sra-experiment　 ERX1600771
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:48:48Z
dateModified 2021-09-24T10:04:19Z
datePublished 2016-07-14T16:22:14Z