home > sra-sample > ERS1247330
identifier ERS1247330
type sra-sample
sameAs
biosample  SAMEA4076220
organism bird metagenome
attributes
ENA first public  2016-07-13
ENA last update  2016-07-13
External Id  SAMEA4076220
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-13T17:01:27Z
INSDC last update  2016-07-13T01:15:02Z
INSDC status  public
Submitter Id  qiita_sid_1632:1632.E2G07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude  0
anonymized name  E2G07
arcsine_fledge_success_brood  Missing: Not collected
arcsine_fledge_success_clutch  Missing: Not collected
arcsine_hatching_success  1.150261992
area  Dolar
assigned_from_geo  true
backup  false
bird_family  Laniidae
bird_order  Passeriformes
broken_eggs  0
brood_size  5
clutch_size  6
code_id_statistica  58
coll_date_juliane_days  119
collection date  4/30/07 0:00
collection_timestamp  4/30/07
common name  organismal metagenome
country  GAZ:Spain
country_nation  Spain
country_region  Hoya de Guadix
culturing_date  5/4/07
depth  0
dna_extracted  true
elevation  1154
empo_0  EMP sample
empo_1  Host-associated
empo_2  Animal
empo_3  Animal surface
enterobacteriaceae_density  5703965.945
enterococcus_density  21.2948062
env biome  mediterranean shrubland biome
env feature  nest of bird
env matter  egg
env package  host-associated
eppendorf_name  Alcauda_n 2
estefania_plates  2G07
extracted DNA avail now  true
feathers  true
fledge_success_brood  Missing: Not collected
fledge_success_clutch  Missing: Not collected
fledging_date  Missing: Not collected
geo loc name  Spain:Hoya de Guadix
hatching_date  5/15/07
hatching_success  0.833333333
hatching_synchrony  asyn
host common name  Southern grey shrike
host scientific name  Passeriformes
host subject id  Alcaudon.Alcaudon2.1
host taxid  219215
latitude  37.19090278
lay_date_juliane_days  111
laying_date  7/21/07
log_enterobacteriaceae_density  6.756177
log_enterococcus_density  1.348203701
log_mesophiles_density  7.098599639
log_rel_growth_enterobact  -0.062147895
log_rel_growth_enterococcus  -1.042610356
log_rel_growth_mesophiles  -0.203243484
log_rel_growth_staphylococcus  -0.098127664
log_staphylococcus_density  0.098127664
longitude  -2.992936111
mesophiles_density  1.254872508E7
nest_type  open
number_fledging  Missing: Not provided
number_sampled_eggs  6
observer  Juan
physical_location_1  U Granada
physical_specimen_location  CCME
physical_specimen_remaining  true
plants  true
platero_plates  P2C010
public  true
rel_growth_enterobacteriaceae  -0.13333331
rel_growth_enterococcus  -0.909345442
rel_growth_staphylococcus  -0.202239854
relative_growth_mesophiles  -0.373737344
required_sample_info_status  completed
sample name  qiita_sid_1632:1632.E2G07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type  bird egg shell
sample_nest  Alcaudon.Alcaudon2.1
sample_progress  sequenced (16S)
sampling time  1
sampling_code_id  178
species name  Lanius meridionalis
staphylococcus_density  0.253509598
storing_days  4
unhatched_eggs  1
year  2007
properties 
{...}
dbXrefs
bioproject  PRJEB14786
sra-run  ERR1529894
sra-submission  ERA674159
biosample  SAMEA4076220
sra-study  ERP016455
sra-experiment  ERX1600786
distribution JSONJSON-LD
Download
ERA674159.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:48:51Z
dateModified 2021-09-24T10:04:28Z
datePublished 2016-07-14T16:22:14Z